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	1	+= Bayesian Virtual Epileptic Patient (BVEP) =
	2	+
	3	+
	4	+Bayesian Virtual Epileptic Patient (BVEP) to invert a individualized whole-brain model of epilepsy spread by PPLs using No-U-Turn Sam- pler (NUTS) and Automatic Differentiation Variational Inference (ADVI).
	5	+
	6	+Installation:
	7	+
	8	+For simulation using TVB:
	9	+
	10	+[[https:~~/~~/www.thevirtualbrain.org/tvb/zwei>>url:https://www.thevirtualbrain.org/tvb/zwei]]
	11	+
	12	+For inference using Stan:
	13	+
	14	+[[https:~~/~~/mc-stan.org/>>url:https://mc-stan.org/]]
	15	+
	16	+For inference using PyMC3:
	17	+
	18	+[[https:~~/~~/docs.pymc.io/>>url:https://docs.pymc.io/]]
	19	+
	20	+
	21	+Notebooks:
	22	+
	23	+Bayesian inference of Epiletor model:
	24	+
	25	+[[https:~~/~~/lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/FittingEpileptor2D.ipynb>>https://lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/FittingEpileptor2D.ipynb]]
	26	+
	27	+Cross-validation and hypothesis inference :
	28	+
	29	+[[https:~~/~~/lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/EpileptorInferHyposPrior.ipynb>>https://lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/EpileptorInferHyposPrior.ipynb]]
	30	+
	31	+Bayesian inference of VEP brain model:
	32	+
1	1	[[https:~~/~~/lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/BVEP_noncen_pymc3_patient1.ipynb>>https://lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/BVEP_noncen_pymc3_patient1.ipynb]]