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1		-= Bayesian Virtual Epileptic Patient (BVEP) =
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4		-Bayesian Virtual Epileptic Patient (BVEP) to invert a individualized whole-brain model of epilepsy spread by PPLs using No-U-Turn Sam- pler (NUTS) and Automatic Differentiation Variational Inference (ADVI).
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6		-Installation:
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8		-For simulation using TVB:
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10		-[[https:~~/~~/www.thevirtualbrain.org/tvb/zwei>>url:https://www.thevirtualbrain.org/tvb/zwei]]
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12		-For inference using Stan:
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14		-[[https:~~/~~/mc-stan.org/>>url:https://mc-stan.org/]]
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16		-For inference using PyMC3:
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18		-[[https:~~/~~/docs.pymc.io/>>url:https://docs.pymc.io/]]
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20		-
21		-Notebooks:
22		-
23		-Bayesian inference of Epiletor model:
24		-
25		-[[https:~~/~~/lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/FittingEpileptor2D.ipynb>>https://lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/FittingEpileptor2D.ipynb]]
26		-
27		-Cross-validation and hypothesis inference :
28		-
29		-[[https:~~/~~/lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/EpileptorInferHyposPrior.ipynb>>https://lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/EpileptorInferHyposPrior.ipynb]]
30		-
31		-Bayesian inference of VEP brain model:
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33	33	[[https:~~/~~/lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/BVEP_noncen_pymc3_patient1.ipynb>>https://lab.ebrains.eu/user/mhashemi/lab/tree/drive/Shared%20with%20groups/Bayesian%20Virtual%20Epileptic%20Patient/BVEP_noncen_pymc3_patient1.ipynb]]