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Last modified by adavison on 2023/10/11 21:18
From version 14.1
edited by adavison
on 2023/10/11 21:01
Change comment: There is no comment for this version
To version 4.1
edited by zoelaffitte
on 2021/06/09 15:04
Change comment: There is no comment for this version

Summary

Details

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1 -XWiki.adavison
1 +XWiki.zoelaffitte
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2 2  (((
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5 -(% class="box infomessage" %)
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7 -This collab is under development, it is currently private. When the first case study is ready it will be made public.
5 += My Collab's Extended Title =
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7 +My collab's subtitle
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9 9  
10 -(% class="lead" id="HAcollectionofJupyternotebooksdemonstratinghowtomakeuseofEBRAINSdatasets" %)
11 -A collection of Jupyter notebooks demonstrating how to make use of EBRAINS datasets
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15 += What can I find here? =
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13 -Each case study consists of a Jupyter notebook, which shows how to obtain the data and metadata associated with a given dataset, shows how to read the datafile contents, and contains some example visualisations and analyses.
17 +* Notice how the table of contents on the right
18 +* is automatically updated
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14 14  
15 -If you would like to run the notebook yourself we recommend you copy it to one of  your own collabs so that you can save any changes you might make. All notebooks are made available under the [[Creative Commons Attribution Licence (CC-BY)>>https://creativecommons.org/licenses/by/4.0/]].
21 += Who has access? =
16 16  
17 -More case studies will be added over time, so please check back regularly.
23 +Describe the audience of this collab.
24 +)))
18 18  
19 -=== List of case studies ===
20 20  
21 -* [[Salgueiro-Pereira & Marie: Excitability profile of CA1 pyramidal neurons in APPPS1 Alzheimer disease mice and control littermates>>https://lab.ebrains.eu/hub/user-redirect/git-pull?repo=https%3A%2F%2Fgithub.com%2FNeuroPSI-Neuroinformatics%2Fcase-studies-for-data-reuse&urlpath=lab%2Ftree%2Fcase-studies-for-data-reuse%2F10.25493-YJFW-HPY%2FSalgueiroPereiraMarie2020.ipynb&branch=main]]
22 -* [[Tognolina: Whole cell patch-clamp recordings of cerebellar granule cells>>doc:Tognolina: Whole cell patch-clamp recordings of cerebellar granule cells]]
23 -* [[Mansvelder: Physiological data recording of interneurons from human temporal neocortex>>https://wiki.ebrains.eu/bin/view/Collabs/case-studies-for-data-reuse/Mansvelder%3A%20Physiological%20data%20recording%20of%20interneurons%20from%20human%20temporal%20neocortex]]
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28 +(((
29 +{{box title="**Contents**"}}
30 +{{toc/}}
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owner
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1 -zoelaffitte