Changes for page Case studies for data reuse
Last modified by adavison on 2023/10/11 21:18
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... ... @@ -1,25 +1,35 @@ 1 -(% class="ro w" %)1 +(% class="jumbotron" %) 2 2 ((( 3 -(% class="co l-xs-12 col-sm-12" %)3 +(% class="container" %) 4 4 ((( 5 -(% class="box infomessage" %) 6 -((( 7 -This collab is under development, it is currently private. When the first case study is ready it will be made public. 8 -))) 5 += Case studies for data reuse = 9 9 10 -(% class="lead" id="HAcollectionofJupyternotebooksdemonstratinghowtomakeuseofEBRAINSdatasets" %) 11 11 A collection of Jupyter notebooks demonstrating how to make use of EBRAINS datasets 8 +))) 9 +))) 12 12 13 -Each case study consists of a Jupyter notebook, which shows how to obtain the data and metadata associated with a given dataset, shows how to read the datafile contents, and contains some example visualisations and analyses. 11 +(% class="row" %) 12 +((( 13 +(% class="col-xs-12 col-sm-8" %) 14 +((( 15 += What can I find here? = 14 14 15 -If you would like to run the notebook yourself we recommend you copy it to one of your own collabs so that you can save any changes you might make. All notebooks are made available under the [[Creative Commons Attribution Licence (CC-BY)>>https://creativecommons.org/licenses/by/4.0/]]. 17 +* Notice how the table of contents on the right 18 +* is automatically updated 19 +* to hold this page's headers 16 16 17 - Morecasestudies will beadded over time,so pleasecheck back regularly.21 += Who has access? = 18 18 19 -=== List of case studies === 23 +This collab is under development, it is currently private. When the first case study is ready it will be made public. 24 +))) 20 20 21 -* [[Salgueiro-Pereira & Marie: Excitability profile of CA1 pyramidal neurons in APPPS1 Alzheimer disease mice and control littermates>>https://lab.ebrains.eu/hub/user-redirect/git-pull?repo=https%3A%2F%2Fgithub.com%2FNeuroPSI-Neuroinformatics%2Fcase-studies-for-data-reuse&urlpath=lab%2Ftree%2Fcase-studies-for-data-reuse%2F10.25493-YJFW-HPY%2FSalgueiroPereiraMarie2020.ipynb&branch=main]] 22 -* [[Tognolina: Whole cell patch-clamp recordings of cerebellar granule cells>>doc:Tognolina: Whole cell patch-clamp recordings of cerebellar granule cells]] 23 -* [[Mansvelder: Physiological data recording of interneurons from human temporal neocortex>>https://wiki.ebrains.eu/bin/view/Collabs/case-studies-for-data-reuse/Mansvelder%3A%20Physiological%20data%20recording%20of%20interneurons%20from%20human%20temporal%20neocortex]] 26 + 27 +(% class="col-xs-12 col-sm-4" %) 28 +((( 29 +{{box title="**Contents**"}} 30 +{{toc/}} 31 +{{/box}} 32 + 33 + 24 24 ))) 25 25 )))
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