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Last modified by adavison on 2023/10/11 21:18
From version 15.1
edited by adavison
on 2023/10/11 21:03
Change comment: There is no comment for this version
To version 2.1
edited by zoelaffitte
on 2021/06/09 15:04
Change comment: There is no comment for this version

Summary

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2 2  (((
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7 -This collab is under development, it is currently private. When the first case study is ready it will be made public.
5 += My Collab's Extended Title =
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9 9  
10 -(% class="lead" id="HAcollectionofJupyternotebooksdemonstratinghowtomakeuseofEBRAINSdatasets" %)
11 -A collection of Jupyter notebooks demonstrating how to make use of EBRAINS datasets
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15 += What can I find here? =
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13 -Each case study consists of a Jupyter notebook, which shows how to obtain the data and metadata associated with a given dataset, shows how to read the datafile contents, and contains some example visualisations and analyses.
17 +* Notice how the table of contents on the right
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15 -Clicking on one of the links below will copy a notebook and any associated files to your home directory in the EBRAINS Lab so that you can save any changes you might make. All notebooks are made available under the [[Creative Commons Attribution Licence (CC-BY)>>https://creativecommons.org/licenses/by/4.0/]].
21 += Who has access? =
16 16  
17 -More case studies will be added over time, so please check back regularly.
23 +Describe the audience of this collab.
24 +)))
18 18  
19 -=== List of case studies ===
20 20  
21 -* [[Salgueiro-Pereira & Marie: Excitability profile of CA1 pyramidal neurons in APPPS1 Alzheimer disease mice and control littermates>>https://lab.ebrains.eu/hub/user-redirect/git-pull?repo=https%3A%2F%2Fgithub.com%2FNeuroPSI-Neuroinformatics%2Fcase-studies-for-data-reuse&urlpath=lab%2Ftree%2Fcase-studies-for-data-reuse%2F10.25493-YJFW-HPY%2FSalgueiroPereiraMarie2020.ipynb&branch=main||rel=" noopener noreferrer" target="_blank"]]
22 -* [[Tognolina: Whole cell patch-clamp recordings of cerebellar granule cells>>doc:Tognolina: Whole cell patch-clamp recordings of cerebellar granule cells]]
23 -* [[Mansvelder: Physiological data recording of interneurons from human temporal neocortex>>https://wiki.ebrains.eu/bin/view/Collabs/case-studies-for-data-reuse/Mansvelder%3A%20Physiological%20data%20recording%20of%20interneurons%20from%20human%20temporal%20neocortex]]
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28 +(((
29 +{{box title="**Contents**"}}
30 +{{toc/}}
31 +{{/box}}
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33 +
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25 25  )))
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