Last modified by kuschlionel on 2022/04/29 01:20
From version 20.1
edited by kuschlionel
on 2020/08/25 10:35
Change comment: There is no comment for this version
To version 22.1
edited by kuschlionel
on 2020/08/25 10:44
Change comment: There is no comment for this version

Summary

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20 20  
21 21  This project is a proof of concept for co-simulation of network models with regions represented at different scales (spiking neurons and mean-fields) integrating the activity from the corresponding simulators (NEST and TVB).(OP1.11).
22 22  
23 -This prototype is based on future co-simulation between TVB and Nest with other simulators.
23 +This prototype is based on future co-simulation between TVB and Nest with other simulators (Arbor, Neurons, .
24 24  
25 25  = Demonstration : Mouse Brain from neurons to brain regions =
26 26  
27 -You can find the demonstration of this proof of concept in the lab : [[https:~~/~~/lab.ebrains.eu/user/user-redirect/lab/tree/drive/Shared%20with%20all/Co-simulation%20TVB%20and%20Nest%20multiscale/demonstration_mouse_brain.ipynb>>https://lab.ebrains.eu/user/kuschlionel/lab/tree/drive/Shared%20with%20groups/Co-simulation%20TVB%20and%20Nest%20multiscale/demonstration_mouse_brain.ipynb]]
28 -\\This proof of concept prove that the co-simulation can be done but it misses the validation of the coupling simulation.
27 +You can find the demonstration of this proof of concept in the lab: [[https:~~/~~/lab.ebrains.eu/user/user-redirect/lab/tree/drive/Shared%20with%20all/Co-simulation%20TVB%20and%20Nest%20multiscale/demonstration_mouse_brain.ipynb>>https://lab.ebrains.eu/user/user-redirect/lab/tree/drive/Shared%20with%20all/Co-simulation%20TVB%20and%20Nest%20multiscale/demonstration_mouse_brain.ipynb]]
29 29  
29 +This proof of concepts prove that the co-simulation can be done, but it misses the validation of the coupling simulation.
30 +
30 30  = The implementation : easy to reconfigure =
31 31  
32 32  The code of the proof of concept is available in this repository : [[https:~~/~~/github.com/multiscale-cosim/TVB-NEST>>url:https://github.com/multiscale-cosim/TVB-NEST]]
33 33  
34 -All the instruction of the installation and the usage of it are in the Read Me.
35 -\\This project is designed in order to be reusable and configurable for the people who want to do co-simulation.
36 -The main idea is all simulator and translators are independent but shared parameters for configuration and communication.
37 -The following figure will give an idea of the interconnection between simulators and translator for the demonstration case :
35 +All the instruction of the installation and the usage of it are in the Readme.
36 +\\This project is designed to be reusable and configurable for the researchers who want to do co-simulation across scales using supercomputer.
37 +The main idea is that all simulators and translator are independent, but they share parameters for configuration and communication.
38 +The following figure will give an idea of the interconnection between the simulators and translator for the demonstration case :
38 38  
39 39  
40 40  [[image:co-simulation-page.png]]
41 41  
42 42  The demonstration should be used as an example of how to use the proof of concept for your own application.
43 -All the simulator has his own folder which contains the configuration for your application. A script in the folder allows the orchestrator to launch the simulator with the good configuration. The second role of the orchestrator is to create the environment for the simulation which guarantees that all components connect with the others.
44 +All the simulators haves their own folder which contains the configuration for your application. A script in the folder allows the orchestrator to launch the simulator with the good configuration. The second role of the orchestrator is to create the environment for the simulation which guarantees that all components are properly connected with each others.
44 44  
45 45  = Who has access? =
46 46