Last modified by richtesn on 2023/06/14 12:18
From version 7.1
edited by richtesn
on 2021/06/14 11:45
Change comment: There is no comment for this version
To version 9.1
edited by richtesn
on 2023/06/14 12:18
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -16,7 +16,7 @@
16 16  
17 17  == Input Data ==
18 18  
19 -In this use case, we use as our input structure a structure of the catalytic domain of the enzyme adenylyl cyclase 5 (AC5), modelled during the work described in |doi_tong|.
19 +In this use case, we use as our input structure a structure of the catalytic domain of the enzyme adenylyl cyclase 5 (AC5), modelled during the work described in [[Tong et al. (2016)>>https://doi.org/10.1002/prot.25167]]
20 20  
21 21  The structures of the AC isoforms were created via homology modelling using the same template. The region where there are significant structural differences between the isoforms is in a flexible loop region that was not defined in the template structure. There are also variations in sequence length across AC isoforms in this region.
22 22  
... ... @@ -41,7 +41,7 @@
41 41  
42 42  == Related Jupyter Notebook ==
43 43  
44 -Please note: For technical reasons the notebooks currently are not running live in the collaboratory.
44 +Please note: In the lab where the notebook is running, please select the kernel: EBRAINS-23.02
45 45  
46 46  {{jupyterlink}}
47 47  https://lab.ebrains.eu/user-redirect/lab/tree/shared/Molecular%20Tools:%20protein%20association%20rates%20and%20binding%20sites/JN/Identify_potential_protein_binding_sites_of_a_set_of_protein_isoforms.ipynb