Last modified by richtesn on 2023/06/14 12:19

From version 4.1
edited by richtesn
on 2021/06/11 13:31
Change comment: Uploaded new attachment "electrostatics.png", version {1}
To version 5.1
edited by richtesn
on 2021/06/11 13:39
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -47,6 +47,13 @@
47 47  
48 48  This figure illustrates a structure of enzyme adenylyl cyclase 5 (AC5).
49 49  
50 +(% style="text-align:center" %)
50 50  [[image:electrostatics.png||alt="Electrostatics of AC5" height="388" width="500"]]
51 51  
52 52  This is a representation of a molecular viewer that demonstrates a computed electrostatic potential. The potential is set to zero inside the solvent excluded volume of AC5, to make visualization easier. The potential is displayed as two isopotential surfaces, at potentials of {{formula}}1\ k_B T/e{{/formula}} (blue) and {{formula}}-1 k_B T/e{{/formula}} (red). For comparison, the same potential is shown in Figure 4F of [[Tong et al (2016)>>https://doi.org/10.1002/prot.25167]].
54 +
55 +== Related Jupyter Notebook ==
56 +
57 +{{jupyterlink}}
58 +https://lab.ebrains.eu/user-redirect/lab/tree/shared/Molecular%20Tools:%20protein%20association%20rates%20and%20binding%20sites/JN/multipipsaCalcEP.ipynb
59 +{{/jupyterlink}}