Changes for page data-curation-copy

Last modified by eapapp on 2023/07/04 16:46
From version 129.1
edited by jan
on 2023/05/24 10:50
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To version 146.2
edited by ingrreit
on 2023/06/05 09:23
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1 -XWiki.jan
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1 1  == Publishing neuroscience data, models and software via EBRAINS ==
2 2  
3 -The aim of this collab is to provide you with all the information you need to publish your experimental data, simulations, computational models, and software via EBRAINS. Have you already published your data somewhere else? You can increase the exposure and impact of your shared dataset by also listing it on EBRAINS.
4 4  
4 +(% class="wikigeneratedid" %)
5 +The aim of this collab is to provide you with detailed information about publishing data, simulations, computational models, and software via EBRAINS. If you want a quick overview of the sharing process, see [[https:~~/~~/ebrains.eu/service/share-data>>https://ebrains.eu/service/share-data]].
6 +
5 5  {{box title="**Contents**"}}
6 6  {{toc depth="3" start="2"/}}
7 7  {{/box}}
8 8  
9 9  
10 -(% style="text-align: center;" %)
11 -**Get started! **
12 +== **Information to get started** ==
12 12  
13 -(% style="text-align: center;" %)
14 -**[[REQUEST CURATION>>https://nettskjema.no/a/277393#/]] **
14 +**Get started! [[REQUEST CURATION>>https://nettskjema.no/a/277393#/]] to share data, simulations, computational models, and software, - or a new version of an existing one. **
15 15  
16 -(% style="text-align: center;" %)
17 - Search existing data, models and software in [[the EBRAINS Knowledge Graph Search>>https://kg.ebrains.eu/search/?facet_type[0]=Dataset]]
16 +Have you already published your data somewhere else? You can increase the exposure and impact of your shared dataset by also listing it on EBRAINS.
18 18  
19 19  
19 +Search existing data, models and software in [[the EBRAINS Knowledge Graph Search>>https://kg.ebrains.eu/search/?facet_type[0]=Dataset]]
20 +
21 +
22 +EBRAINS accepts data from all modalities and from all species, as well as models, software, web services and metadata models (collectively referred to as research products) for sharing. You'll find detailed information about how to share each research product below. 
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25 +(% class="box infomessage" %)
26 +(((
27 +We strongly recommend to **start preparing for data sharing as early as possible**. With a structured data repository and adequate notes on how the data was acquired, you greatly minimize the effort required to publish your data. The time it takes to share data on EBRAINS heavily depends on on the engagement from the researcher and how well the data and metadata is prepared before-hand. Contact us for personalised guidance on how to prepare for sharing.
28 +)))
29 +
30 +(% class="box successmessage" %)
31 +(((
32 +**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases
33 +)))
34 +
20 20  ----
21 21  
22 22  == **The EBRAINS curation process** ==
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37 37  
38 38  (% class="box infomessage" %)
39 39  (((
40 -**We strongly recommend to start preparing for data sharing as early as possible.** With a structured data repository and adequate notes on how the data was acquired, you greatly minimize the effort required to publish your data. The time it takes to share data on EBRAINS heavily depends on on the engagement from the researcher and how well the data and metadata is prepared before-hand. **[[Contact us for personalised guidance on how to prepare for sharing>>mailto:curation-support@ebrains.eu]]. **
55 +
41 41  )))
42 42  
43 43  (% class="box successmessage" %)
44 44  (((
45 -**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases.
60 +
46 46  )))
47 47  
48 48  ----
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141 141  
142 142  === Step by Step - Code ===
143 143  
144 -(% style="color:#e74c3c" %)@Jan/Benni
159 +[[[[image:swc-flow-no-header.png||alt="swc-flow.png"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]]
145 145  
146 -[place-holder-process-diagram]
147 -
148 -
149 -
150 -1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]].
161 +1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]].[[[[image:Thumb.png||alt="EBRAINS-Share-Software.pdf" height="377" style="float:right" width="257"]]>>attach:EBRAINS-Share-Software.pdf]]
151 151  1. One of our creators will then open a ticket and contact you with futher instructions. In these instructions you will find the links to your software and software version entries in the Knowledge Graph.
152 152  1. In the next step you need to enter the metadata of your software in the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided in the ticket. The links will lead you to the space in the KG, which was created especially for you. You can start directly with the editing of your software. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support.
153 153  1. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary.
154 154  1. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.
155 155  
167 +If you want to add a new version to an already curated software, please write to [[curation-support@humanbrainproject.eu>>path:mailto:curation-support@humanbrainproject.eu]] or open a ticket at [[https:~~/~~/support.humanbrainproject.eu/.>>url:https://support.humanbrainproject.eu/]]
168 +For more information, visit our [[guide>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]].
169 +
156 156  ----
157 157  
158 158  === Webservices and metadata models ===
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175 175  Neuroscience (PhD)(%%)
176 176  (% class="small" style="color:#4a5568" %)**Behavioral neuroscience and microscopy**
177 177  )))|(% style="width:303px" %)(((
178 -[[image:My project.jpg||height="209" width="167"]]
192 +[[image:Camilla.jpg||alt="My project.jpg" height="209" width="167"]]
179 179  
180 180  **Camilla H. Blixhavn**
181 181  
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202 202  (% class="small" style="color:#4a5568" %)**Neuroimaging **
203 203  )))
204 204  
205 -
219 +|(% style="width:303px" %)(((
220 +[[image:My project.jpg||height="209" width="167"]]
221 +
222 +**Heidi Kleven**
223 +
224 +(% class="small" %)Curation Scientist,
225 +Phd Student
226 +Neuroscience (M. Sc.)(%%)
227 +(% class="small" style="color:#4a5568" %)**Neuroanatomy and brain atlases**
228 +)))| | |
229 +
230 +
206 206  \\**Located in Germany:**
207 207  
233 +|(% style="width:303px" %)(((
208 208  [[image:My project (2).jpg||height="209" width="167"]]
209 209  
210 210  **Jan Gündling**
211 211  
212 -(% class="small" %)Curation Scientist
238 +(% class="small" %)Curation Scientist,
239 +Phd Student
213 213  Sensors and Cognitive Psychology (M. Sc.)(%%)
214 -(% class="small" style="color:#4a5568" %)**Human-Computer Interaction **
241 +(% class="small" style="color:#4a5568" %)**Human-Computer Interaction**
242 +)))|(% style="width:303px" %)(((
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215 215  
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254 +
255 +**Lyuba Zehl**
256 +
257 +(% class="small" %)Knowledge Systems Engineer
258 +Dr. rer. nat. (Systems Neuroscience)(%%)
259 +(% class="small" style="color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
260 +)))|(% style="width:303px" %) |
261 +
216 216  ----
217 217  
218 218  == **Information and resources for researchers looking to share data** ==
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