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19 +
1 1  == Publishing neuroscience data, models and software via EBRAINS ==
2 2  
3 3  
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8 8  {{toc depth="3" start="2"/}}
9 9  {{/box}}
10 10  
11 -
12 12  == **Information to get started** ==
13 13  
14 14  **[[REQUEST CURATION>>https://nettskjema.no/a/277393#/]] to share data, simulations, computational models, and software, - or to add a new version of an existing one. **
... ... @@ -16,6 +16,7 @@
16 16  Have you already published your data somewhere else? You can increase the exposure and impact of your shared dataset by also listing it on EBRAINS.
17 17  
18 18  
37 +(% style="text-align: center;" %)
19 19  Search existing data, models and software in [[the EBRAINS Knowledge Graph Search>>https://kg.ebrains.eu/search/?facet_type[0]=Dataset]]
20 20  
21 21  
... ... @@ -29,7 +29,7 @@
29 29  
30 30  (% class="box successmessage" %)
31 31  (((
32 -**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases
51 +**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases. Reach us at [[curation-support@ebrains.eu>>mailto:curation-support@ebrains.eu]]
33 33  )))
34 34  
35 35  ----
... ... @@ -54,27 +54,41 @@
54 54  
55 55  [[image:image-20230326054341-1.png]]
56 56  
57 -==== ====
76 +(% class="box floatinginfobox" id="share-data-infographic" %)
77 +(((
78 +(% style="text-align:center" %)
79 +//Download our infographic//
80 +//with all you need to know//
81 +//to share data on EBRAINS: //
82 +// //
83 +[[[[image:image-20230324171114-2.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]
58 58  
59 -(% style="width:1841.22px" %)
60 -|(% style="width:344px" %)(((
61 -[[[[image:image-20230324171114-2.png||height="354" width="250"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]
62 -)))|(% style="width:1493px" %)//Collection of useful information for researchers looking to share experimental data on EBRAINS.//
85 +
86 +)))
63 63  
88 +
64 64  ==== **1. Provide some general information about your dataset** ====
65 65  
66 66  
67 -[[image:https://lh3.googleusercontent.com/zh7TvO6w04YGW9jIhfhmdT6CexdGs-AWOLfJXKRq7-tdHOu6ar1rOQx8o4rZevrjXqgPZ7-Ejv4b6X9XpgXuHpdUXi-mBTHIUnv5Vz-DktHt0sP-PZ3gE8XgZid3TV3swV1uTCBhHx11ge0pjP7RVxswGQ=s2048||height="85px;" width="91px;"]]** Fill in the [[Curation request form>>https://nettskjema.no/a/277393#/]]. **This form collects preliminary information about your data, allowing us to assess whether the dataset fits within the scope of EBRAINS. The submission generates a curation ID allowing us to track the case.
92 +[[image:https://lh3.googleusercontent.com/zh7TvO6w04YGW9jIhfhmdT6CexdGs-AWOLfJXKRq7-tdHOu6ar1rOQx8o4rZevrjXqgPZ7-Ejv4b6X9XpgXuHpdUXi-mBTHIUnv5Vz-DktHt0sP-PZ3gE8XgZid3TV3swV1uTCBhHx11ge0pjP7RVxswGQ=s2048||height="85px;" width="91px;"]]** Fill in the [[Curation request form>>https://nettskjema.no/a/277393#/]]. **
68 68  
94 +This form collects preliminary information about your data, allowing us to assess whether the dataset fits within the scope of EBRAINS. The submission generates a curation ID allowing us to track the case.
69 69  
70 -[[image:https://lh6.googleusercontent.com/yw442oS6BwZOlY-_0BoVxyCW3DrdcJ5ogCes92iOD16_rgNEVk56aNMDaVWXFfBLYv24bHzmGgBF9wg0szjH70xzuRTqxoQAeuy3knNO7axCHoyZDXwtyTcMgFnYwbOYxOT29LK-zchrUKLW6Mle93kOkQ=s2048||height="94px;" width="94px;"]]**Fill in the [[Ethics and Regulatory compliance form>>https://nettskjema.no/a/224765]]**. This form collects the necessary information needed for us to evaluate whether we can ethically and legally share the data via EBRAINS.
71 71  
97 +[[image:https://lh6.googleusercontent.com/yw442oS6BwZOlY-_0BoVxyCW3DrdcJ5ogCes92iOD16_rgNEVk56aNMDaVWXFfBLYv24bHzmGgBF9wg0szjH70xzuRTqxoQAeuy3knNO7axCHoyZDXwtyTcMgFnYwbOYxOT29LK-zchrUKLW6Mle93kOkQ=s2048||height="94px;" width="94px;"]]**Fill in the [[Ethics and Regulatory compliance form>>https://nettskjema.no/a/224765]]**.
72 72  
99 +This form collects the necessary information needed for us to evaluate whether we can ethically and legally share the data via EBRAINS.
100 +
101 +See below for information about the ethical and legal aspects concerning sharing of human subject data.
102 +
103 +
73 73  ==== **2. Upload data ** ====
74 74  
75 75  
76 -[[image:https://lh5.googleusercontent.com/sieKO-kW8O18iPaUyonwyo4UfHBmtc2E9BDnjbx52j6J_uGmm-OzGAo7sloMk3sYwKa6QW3hYQsOA9N4H7uGQpca088Wrk0Nurpt_J3B0-NSbcaPNdZIh21otQcG6jnAxLGiKoEvkTyaDGTMk3fu7me8mQ=s2048||height="94px;" width="94px;"]]**Ensure data is structured consistently prior to upload. **We look for organized data, not organized according to our standard. This is to support the broadest degree of sharing possible. We do however require that the data is organized in a consistent and precise manner. Please see our// //[[collection of guidelines on data organization>>https://drive.ebrains.eu/smart-link/25299f04-c4e5-4028-8f5f-3b8208f9a532/]] for further guidance.
107 +[[image:https://lh5.googleusercontent.com/sieKO-kW8O18iPaUyonwyo4UfHBmtc2E9BDnjbx52j6J_uGmm-OzGAo7sloMk3sYwKa6QW3hYQsOA9N4H7uGQpca088Wrk0Nurpt_J3B0-NSbcaPNdZIh21otQcG6jnAxLGiKoEvkTyaDGTMk3fu7me8mQ=s2048||height="94px;" width="94px;"]]**Ensure data is structured consistently prior to upload. **
77 77  
109 +We look for organized data, not organized according to our standard. This is to support the broadest degree of sharing possible. We do however require that the data is organized in a consistent and precise manner. Please see our// //[[collection of guidelines on data organization>>https://drive.ebrains.eu/smart-link/25299f04-c4e5-4028-8f5f-3b8208f9a532/]] for further guidance.
110 +
78 78  [[image:https://lh5.googleusercontent.com/EWtYwfVlbeC-jqPasgmzidqc50GrkKIEgwXeUeql8aaMHIukmFdWEy0nufVWWATbxDDK3XwwZEDmASrbpCsBk1u0HpAd8x4ZgAMsMPRcWyrb9etlV6FgKE_QN2e6SqKxHE0rzkR8uI1rRW_5z21TFGYVnw=s2048||height="91px;" width="91px;"]]**Upload data to EBRAINS Storage, either using a drag-and-drop solution (opt. 1) or an interactive python script (opt. 2).**
79 79  
80 80  //Opt. 1. //For smaller datasets with a reasonable amount of files, we recommend using the Collab-Bucket solution (drag-and-drop). A Collab Bucket must first be assigned to a dataset, which happens when a datasets is accepted for sharing.
... ... @@ -87,15 +87,12 @@
87 87  If a data collection is already uploaded elsewhere, we may link to the already existing repository.
88 88  
89 89  
90 -
91 -|(% style="width:369px" %) |(% style="width:1467px" %)
92 -
93 93  ==== **3. Submit metadata** ====
94 94  
95 95  
96 -[[image:https://lh5.googleusercontent.com/WS4T2LhF9znWWChn3Z550agLrrb-KTWdYVsJSv0lh4cGjKbjuN1WV68WER9xkYqi1UqN7KYZz7bImYz3_TpOuTuvma7T192QUiUZoyJVPk1fj5NSDSQh_kpIeBufAOdDtsDRpPKK_P5EDPqRCTAaOTNyCw=s2048||height="91px;" width="91px;"]]**Submit metadata using our **[[EBRAINS Metadata wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]** (opt. 1), or through direct interaction with the Knowledge Graph (opt. 2) **
126 +[[image:https://lh5.googleusercontent.com/WS4T2LhF9znWWChn3Z550agLrrb-KTWdYVsJSv0lh4cGjKbjuN1WV68WER9xkYqi1UqN7KYZz7bImYz3_TpOuTuvma7T192QUiUZoyJVPk1fj5NSDSQh_kpIeBufAOdDtsDRpPKK_P5EDPqRCTAaOTNyCw=s2048||height="91px;" width="91px;"]]**Submit metadata using the **[[EBRAINS Wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]** (opt. 1), or through direct interaction with the Knowledge Graph (opt. 2) **
97 97  
98 -//Opt. 1.// Manually submit the minimal required metadata via the [[EBRAINS Metadata wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]. The minimal required metadata covers extended bibliographic information necessary to publish your dataset on EBRAINS. The submitted information, including uploaded files, will be sent to the Curation team automatically
128 +//Opt. 1.// Manually submit the minimal required metadata via the [[EBRAINS Wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]. The minimal required metadata covers extended bibliographic information necessary to publish your dataset on EBRAINS. The submitted information, including uploaded files, will be sent to the Curation team automatically
99 99  
100 100  //Opt. 2.// To go beyond the minimal required metadata, you can directly interact with the Knowledge Graph (KG) in your private space. Within the private space, you can upload metadata and interact with them, moreover you can connect your metadata to existing publicly accessible entries. Access to your private space is granted upon the initiation of the curation process. You can access your private space via:
101 101  
... ... @@ -106,29 +106,29 @@
106 106  Datasets published through the EBRAINS Knowledge Graph have to be registered using **openMINDS compliant metadata** delivered as JSON-LD files. See this summary table for an overview of [[the minimally required openMINDS properties for publishing>>https://drive.ebrains.eu/lib/47995dbc-f576-4008-a76c-eefbfd818529/file/ebrains-minimum-required-metadata.xlsx]] on EBRAINS.
107 107  
108 108  
109 -**The openMINDS metadata framework**
110 -
111 -openMINDS (open Metadata Initiative for Neuroscience Data Structures) is a community-driven, open-source metadata framework for graph database systems, such as the EBRAINS Knowledge Graph. It is composed of linked metadata models, libraries of serviceable metadata instances, and supportive tooling ([[openMINDS Python>>url:https://pypi.org/project/openMINDS/]], openMINDS Matlab). For exploring the openMINDS schemas, go to the [[HTML documentation>>url:https://humanbrainproject.github.io/openMINDS/]]. For a full overview of the framework, go to [[the openMINDS collab>>url:https://wiki.ebrains.eu/bin/view/Collabs/openminds/]] or the [[GitHub repository>>https://github.com/HumanBrainProject/openMINDS]].
112 -
113 -For feedback, requests, or contributions, please get in touch with the openMINDS development team via
114 -
115 -* the support-email: [[openminds@ebrains.eu>>path:mailto:openminds@ebrains.eu]]
116 -* the [[GitHub issue tracker>>url:https://github.com/HumanBrainProject/openMINDS/issues]]
117 -* the INCF NeuroStars [[openMINDS Community Forum>>url:https://neurostars.org/t/openminds-community-forum-virtual/20156]]
118 -
119 119  ==== **4. Write a Data Descriptor ** ====
120 120  
141 +[[image:https://lh4.googleusercontent.com/lMYEKOXzejbBydOdotWWteXQo7j363xRyntBGjcPZVEdtIU1CJYX7q1STpdr2JPZK4hpWWXk20UlkUOqDGL5kX6vnQVBSdrfUo6EGfXOwpuGq1Uygv0tTZJ0lRO6voJvg56QC2mufvjAcRXGfAKFOjtc6w=s2048||height="94px;" width="94px;"]]**Write a data descriptor by filling in **[[this template>>https://drive.ebrains.eu/f/a2e07c95b1a54090bbbc/?dl=1]]** . **
121 121  
122 -[[image:https://lh4.googleusercontent.com/lMYEKOXzejbBydOdotWWteXQo7j363xRyntBGjcPZVEdtIU1CJYX7q1STpdr2JPZK4hpWWXk20UlkUOqDGL5kX6vnQVBSdrfUo6EGfXOwpuGq1Uygv0tTZJ0lRO6voJvg56QC2mufvjAcRXGfAKFOjtc6w=s2048||height="94px;" width="94px;"]]**Write a data descriptor by filling in **[[this template>>https://drive.ebrains.eu/f/a2e07c95b1a54090bbbc/?dl=1]]** . **The Data Descriptor is a document helping others interpret and reuse (and prevent misuse) of your data, and is critical to achieve a basic level of FAIR. The document will be uploaded in the repository of the data, shared as a PDF. 
143 +The Data Descriptor is a document helping others interpret and reuse (and prevent misuse) of your data, and is critical to achieve a basic level of FAIR. The document will be uploaded in the repository of the data, shared as a PDF. 
123 123  
145 +See our infographic about the data descriptor for inspiration or guidance.
124 124  
125 -Check out previous examples in the KG Search! See e.g., the data descriptor for the dataset "[[Anterogradely labeled axonal projections from the orbitofrontal cortex in rat>>https://doi.org/10.25493/2MX9-3XF]]".
147 +Check out previous examples in the KG Search. See e.g., the data descriptor for the dataset "[[Anterogradely labeled axonal projections from the orbitofrontal cortex in rat>>https://doi.org/10.25493/2MX9-3XF]]".
126 126  
127 127  Journal publications sufficiently describing the shared data, such as made available through [[Nature Scientific Data>>http://www.nature.com/sdata/about]], [[Elsevier Data in Brief>>http://www.journals.elsevier.com/data-in-brief/]], [[BMC Data note>>https://bmcresnotes.biomedcentral.com/submission-guidelines/preparing-your-manuscript/data-note]] and more, can replace the EBRAINS Data Descriptor.
128 128  
151 +(% class="box floatinginfobox" id="data-descriptor-infographic" %)
152 +(((
153 +(% style="text-align:center" %)
154 +//Download our infographic: //
155 +//The EBRAINS Data//
156 +//Descriptor at a glance//
157 +// //
158 +[[[[image:image-20230324171109-1.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]
159 +
160 +)))
129 129  
130 -|(% style="width:175px" %)[[[[image:image-20230324171109-1.png||height="154" width="109"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]|(% style="width:1662px" %)The EBRAINS Data descriptor at-a-glance
131 -
132 132  ==== **5. Preview and publish ** ====
133 133  
134 134  
... ... @@ -137,20 +137,24 @@
137 137  
138 138  ----
139 139  
140 -==== **Sharing human data ** ====
170 +==== **Sharing human subject data ** ====
141 141  
142 142  (% class="box floatinginfobox" %)
143 143  (((
144 -**Human subject data that can be shared on EBRAINS consists of:**
174 +**Human subject data that can be shared on EBRAINS:**
175 +// //
176 +// - Post-mortem data//
177 +// - Aggregated data//
178 +// - Strongly pseudonymized or de-identified subject data//
179 +// with a legal basis for sharing (e.g. Informed Consent)//
180 +// //
145 145  
146 -- Post-mortem data
147 -- Aggregated data
148 -- Strongly pseudonymized or de-identified subject data with a legal basis for sharing (e.g. Informed Consent)
149 -
150 -(% class="small" %)//If you have human data that does not classify as any of the above, please get in touch and we will clarify the available options. //
182 +(% class="small" %)
183 +//If you have human data that does not qualify as any of the above,//
184 +//please [[get in touch>>https://www.ebrains.eu/contact/]] and we will clarify the available options.//
151 151  )))
152 152  
153 -Human data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we need to assess this is collected via our [[Ethics and Regulatory Compliance Survey>>https://nettskjema.no/a/224765]].
187 +Human subject data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we need to assess this is collected via our [[Ethics and Regulatory Compliance Survey>>https://nettskjema.no/a/224765]].
154 154  
155 155  Post-mortem and aggregated human data can be shared openly, given direct identifiers in the metadata are removed. Strongly pseudonymized and de-identified data can be shared via the Human Data Gateway (HDG).
156 156  
... ... @@ -175,25 +175,33 @@
175 175  
176 176  === Step by Step - Software ===
177 177  
178 -[[[[image:swc-flow-no-header.png||alt="swc-flow.png"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]]
212 +[[[[image:Screenshot 2023-06-06 1122082.png||alt="swc-flow.png" height="136" width="637"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]]
179 179  
180 -~1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions you will find the links to your software and software version entries in the Knowledge Graph.
214 +~1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions, you will find the links to your software and software version entries in the Knowledge Graph.
181 181  
182 182  2. Enter the metadata of your software in your private space of the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided by the curator. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary.
183 183  
184 -3. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.[[[[image:Thumb.png||alt="EBRAINS-Share-Software.pdf" height="315" style="float:right" width="215"]]>>attach:EBRAINS-Share-Software.pdf]]
218 +3. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.
185 185  
186 186  If you want to add a new version to an already curated software, please request this via the [[curation request form>>https://nettskjema.no/a/277393]].
187 187  
188 -For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic.
222 +For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic below.
189 189  
224 +(% style="text-align: right;" %)
225 +==== //Software curation at a glance          //[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] ====
190 190  
227 +----
191 191  
229 +== **The openMINDS metadata framework** ==
192 192  
231 +openMINDS (open Metadata Initiative for Neuroscience Data Structures) is a community-driven, open-source metadata framework for graph database systems, such as the EBRAINS Knowledge Graph. It is composed of linked metadata models, libraries of serviceable metadata instances, and supportive tooling ([[openMINDS Python>>url:https://pypi.org/project/openMINDS/]], openMINDS Matlab). For exploring the openMINDS schemas, go to the [[HTML documentation>>url:https://humanbrainproject.github.io/openMINDS/]]. For a full overview of the framework, go to [[the openMINDS collab>>url:https://wiki.ebrains.eu/bin/view/Collabs/openminds/]] or the [[GitHub repository>>https://github.com/HumanBrainProject/openMINDS]].
193 193  
233 +For feedback, requests, or contributions, please get in touch with the openMINDS development team via
194 194  
235 +* the support-email: [[openminds@ebrains.eu>>path:mailto:openminds@ebrains.eu]]
236 +* the [[GitHub issue tracker>>url:https://github.com/HumanBrainProject/openMINDS/issues]]
237 +* the INCF NeuroStars [[openMINDS Community Forum>>url:https://neurostars.org/t/openminds-community-forum-virtual/20156]]
195 195  
196 -
197 197  ----
198 198  
199 199  == **The curation team: meet the curators** ==
... ... @@ -212,7 +212,7 @@
212 212  
213 213  (% class="small" %)Curation Scientist
214 214  Neuroscience (PhD)(%%)
215 -(% class="small" style="color:#4a5568" %)**Behavioral neuroscience and microscopy**
257 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Behavioral neuroscience and microscopy**
216 216  )))|(% style="width:303px" %)(((
217 217  [[image:Camilla.jpg||alt="My project.jpg" height="209" width="167"]]
218 218  
... ... @@ -221,7 +221,7 @@
221 221  (% class="small" %)Curation Scientist,
222 222  Phd Student
223 223  Neuroscience (M. Sc.)(%%)
224 -(% class="small" style="color:#4a5568" %)**Neuroanatomy and data integration**
266 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and data integration**
225 225  )))|(% style="width:303px" %)(((
226 226  [[image:My project (1).jpg||height="209" width="167"]]
227 227  
... ... @@ -230,7 +230,7 @@
230 230  (% class="small" %)Curation Scientist,
231 231  Phd Student
232 232  Neuroscience (M. Sc.)(%%)
233 -(% class="small" style="color:#4a5568" %)**Neuroanatomy and structural connectivity**
275 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and structural connectivity**
234 234  )))|(% style="width:303px" %)(((
235 235  [[image:My project1.jpg||height="209" width="167"]]
236 236  
... ... @@ -238,7 +238,7 @@
238 238  
239 239  (% class="small" %)Curation Scientist
240 240  Neurocognitive Psychology (M. Sc.)(%%)
241 -(% class="small" style="color:#4a5568" %)**Neuroimaging **
283 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroimaging **
242 242  )))
243 243  
244 244  |(% style="width:303px" %)(((
... ... @@ -249,7 +249,7 @@
249 249  (% class="small" %)Curation Scientist,
250 250  Phd Student
251 251  Neuroscience (M. Sc.)(%%)
252 -(% class="small" style="color:#4a5568" %)**Neuroanatomy and brain atlases**
294 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and brain atlases**
253 253  )))| | |
254 254  
255 255  
... ... @@ -263,8 +263,8 @@
263 263  (% class="small" %)Curation Scientist,
264 264  Phd Student
265 265  Sensors and Cognitive Psychology (M. Sc.)(%%)
266 -(% class="small" style="color:#4a5568" %)**Human-Computer Interaction**
267 -)))|(% style="width:303px" %)(((
308 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Human-Computer Interaction**
309 +)))|(% style="width:328px" %)(((
268 268  
269 269  
270 270  
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272 272  
273 273  
274 274  
275 -
276 -
277 -
278 -
279 -
280 280  **Lyuba Zehl**
281 281  
282 282  (% class="small" %)Knowledge Systems Engineer
283 283  Dr. rer. nat. (Systems Neuroscience)(%%)
284 -(% class="small" style="color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
285 -)))|(% style="width:303px" %) |
321 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
322 +)))|(% style="width:321px" %) |(% style="width:324px" %)
286 286  
287 287  ----
288 288  
... ... @@ -289,17 +289,6 @@
289 289  == **Add practical value to your shared data, model or software** ==
290 290  
291 291  
292 -==== **Add a tutorial or learning resource ** ====
293 -
294 -(% class="wikigeneratedid" id="H-LearningresourceA05Binformation5D" %)
295 -(% style="color:#000000" %)//More information will follow//
296 -
297 -
298 -==== **Create a workflow** ====
299 -
300 -(% class="wikigeneratedid" id="H-Workflows5Binformation5D" %)
301 -(% style="color:#000000" %)//More information will follow//
302 -
303 303  ----
304 304  
305 305  === **Showcase shared data, models or software in other services** ===
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324 324  
325 325  ----
326 326  
353 +==== **Add a tutorial or learning resource ** ====
354 +
355 +(% class="wikigeneratedid" id="H-LearningresourceA05Binformation5D" %)
356 +(% style="--darkreader-inline-color:#ffffff; color:#000000" %)//More information will follow//
357 +
358 +
359 +==== **Create a workflow** ====
360 +
361 +(% class="wikigeneratedid" id="H-Workflows5Binformation5D" %)
362 +(% style="--darkreader-inline-color:#ffffff; color:#000000" %)//More information will follow//
363 +
364 +----
365 +
327 327  === **The benefits of sharing data ** ===
328 328  
329 329  By sharing your data via EBRAINS, you gain access to the following benefits:
... ... @@ -332,57 +332,50 @@
332 332  
333 333  
334 334  
335 -We support you to better follow the FAIR^^ ^^guiding principles for data management and stewardship{{footnote}}Wilkinson, M., Dumontier, M., Aalbersberg, I. et al. The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3, 160018 (2016). https://doi.org/10.1038/sdata.2016.18 {{/footnote}}.  Publishing data, models or code via EBRAINS will provide you with a citeable [[DataCite DOI>>https://www.doi.org/the-identifier/resources/handbook/]] for your research product.
374 +We support you to better follow the [[FAIR^^ ^^guiding principles>>https://www.nature.com/articles/sdata201618]] for data management and stewardship{{footnote}}Wilkinson, M., Dumontier, M., Aalbersberg, I. et al. The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3, 160018 (2016). https://doi.org/10.1038/sdata.2016.18 {{/footnote}}.  Publishing data, models or code via EBRAINS will provide you with a citeable [[DataCite DOI>>https://www.doi.org/the-identifier/resources/handbook/]] for your research product.
336 336  
337 -
338 338  ----
339 339  
340 -=== ===
341 -
342 342  === **Frequently asked questions ** ===
343 343  
344 344  (((
345 -==== ====
381 +==== ====
346 346  
347 347  (((
348 ->The curation process is time consuming and difficult
384 +>Is the curation process time consuming and difficult?
349 349  )))
350 350  )))
351 351  
388 +
352 352  (% class="wikigeneratedid" id="HHowcanIshareA0models3F" %)
353 -Publishing your data naturally takes some time and effort but we will support you as much as possible. If communication is on a regular basis, we are able to finish basic curation - from the initial contact to dataset release - within two weeks.
390 +No, if communication is on a regular basis, we are able to finish curation within two weeks. Publishing your data naturally takes some effort but we will support you as much as possible.
354 354  
355 ->Sharing my data is not beneficial for me - only for others
392 +>Is sharing my data also beneficial for me or only for others?
356 356  
357 357  
358 358  When you publish your data via EBRAINS, we provide comprehensive data management support and safe long term storage - all free of charge. Additionally, your data can be cited, just like a scientific journal article. Sharing your data may even lead to new funding opportunities. Many funders specifically support projects that are part of the “Open Science” initiative.
359 359  
360 ->My data is too insignificant to share
397 +>Can my data be too insignificant to share?
361 361  
362 362  
363 -There is no such thing as insignificant data. Data that is considered insignificant for a given topic, may have great significance for another. By making “insignificant” data publicly available, other researchers may find something interesting that was off-topic for your own purposes.
400 +No, there is no such thing as insignificant data. Data that is considered insignificant for a given topic, may have great significance for another. By making “insignificant” data publicly available, other researchers may find something interesting that was off-topic for your own purposes.
364 364  
365 ->My data can easily be misused if I share it with the world
402 +>Can my data be easily misused if I share it?
366 366  
367 367  
368 -Your data will be covered by a Creative Commons license of your choice. There are a variety of licenses available, enabling you to prevent use for specific purposes, e.g. commercial use.
405 +No, your data will be covered by a Creative Commons license of your choice. There are a variety of licenses available, enabling you to prevent use for specific purposes, e.g. commercial use.
369 369  
370 ->I don't think I'm allowed to share my data
407 +>Can I share my data before my paper is published?
371 371  
372 372  
373 -Many institutions are still very careful about what can be shared and how, but the situation is constantly evolving. As a researcher providing data, you will be asked to fill out an ethics compliance survey which survey to ensure that data published through the EBRAINS platform has been collected according to EU regulations. We are working on solutions for sharing anonymised human data that complies with GDPR standards to protect the identity of research subjects.
410 +Yes, if you do not want to share your data before publishing the results in an article, you can publish your dataset with an embargo status. This will make it possible to find information about the data without making the data itself available, and give you a citeable DOI.
374 374  
375 ->I can't share my data before my paper is published
412 +>Can I lose my competitive edge if I share my data before I publish the associated paper?
376 376  
377 377  
378 -If you do not want to share your data before publishing the results in an article, you can publish your dataset with an embargo status. This will make it possible to find information about the data without making the data itself available, and give you a citeable DOI.
415 +No, publishing your data does not mean that others can use it however they want. Use of your data will require citation, and by choosing an appropriate Creative Commons licence you decide what others are allowed to do with it. If you still feel worried, you can publish your data under embargo, and in this way delay the date of data release, but still make it possible for others to find the information about the data.
379 379  
380 ->If I share my data before I publish the associated paper, I will lose my competitive edge
381 381  
382 -
383 -Publishing your data does not mean that others can use it however they want. Use of your data will require citation, and by choosing an appropriate Creative Commons licence you decide what others are allowed to do with it. If you still feel worried, you can publish your data under embargo, and in this way delay the date of data release, but still make it possible for others to find the information about the data.
384 -
385 -
386 386  ----
387 387  
388 388  == Contact ==
EBRAINS-Share-Software-4.pdf
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