Changes for page data-curation-copy

Last modified by eapapp on 2023/07/04 16:46
From version 168.2
edited by spieschnik
on 2023/06/06 14:46
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To version 149.1
edited by ingrreit
on 2023/06/05 10:33
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18 -
19 -
20 20  == Publishing neuroscience data, models and software via EBRAINS ==
21 21  
22 22  
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27 27  {{toc depth="3" start="2"/}}
28 28  {{/box}}
29 29  
11 +
30 30  == **Information to get started** ==
31 31  
32 32  **[[REQUEST CURATION>>https://nettskjema.no/a/277393#/]] to share data, simulations, computational models, and software, - or to add a new version of an existing one. **
... ... @@ -34,7 +34,6 @@
34 34  Have you already published your data somewhere else? You can increase the exposure and impact of your shared dataset by also listing it on EBRAINS.
35 35  
36 36  
37 -(% style="text-align: center;" %)
38 38  Search existing data, models and software in [[the EBRAINS Knowledge Graph Search>>https://kg.ebrains.eu/search/?facet_type[0]=Dataset]]
39 39  
40 40  
... ... @@ -48,7 +48,7 @@
48 48  
49 49  (% class="box successmessage" %)
50 50  (((
51 -**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases. Reach us at [[curation-support@ebrains.eu>>mailto:curation-support@ebrains.eu]]
32 +**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases
52 52  )))
53 53  
54 54  ----
... ... @@ -73,41 +73,27 @@
73 73  
74 74  [[image:image-20230326054341-1.png]]
75 75  
76 -(% class="box floatinginfobox" id="share-data-infographic" %)
77 -(((
78 -(% style="text-align:center" %)
79 -//Download our infographic//
80 -//with all you need to know//
81 -//to share data on EBRAINS: //
82 -// //
83 -[[[[image:image-20230324171114-2.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]
57 +==== ====
84 84  
85 -
86 -)))
59 +(% style="width:1841.22px" %)
60 +|(% style="width:344px" %)(((
61 +[[[[image:image-20230324171114-2.png||height="354" width="250"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]
62 +)))|(% style="width:1493px" %)//Collection of useful information for researchers looking to share experimental data on EBRAINS.//
87 87  
88 -
89 89  ==== **1. Provide some general information about your dataset** ====
90 90  
91 91  
92 -[[image:https://lh3.googleusercontent.com/zh7TvO6w04YGW9jIhfhmdT6CexdGs-AWOLfJXKRq7-tdHOu6ar1rOQx8o4rZevrjXqgPZ7-Ejv4b6X9XpgXuHpdUXi-mBTHIUnv5Vz-DktHt0sP-PZ3gE8XgZid3TV3swV1uTCBhHx11ge0pjP7RVxswGQ=s2048||height="85px;" width="91px;"]]** Fill in the [[Curation request form>>https://nettskjema.no/a/277393#/]]. **
67 +[[image:https://lh3.googleusercontent.com/zh7TvO6w04YGW9jIhfhmdT6CexdGs-AWOLfJXKRq7-tdHOu6ar1rOQx8o4rZevrjXqgPZ7-Ejv4b6X9XpgXuHpdUXi-mBTHIUnv5Vz-DktHt0sP-PZ3gE8XgZid3TV3swV1uTCBhHx11ge0pjP7RVxswGQ=s2048||height="85px;" width="91px;"]]** Fill in the [[Curation request form>>https://nettskjema.no/a/277393#/]]. **This form collects preliminary information about your data, allowing us to assess whether the dataset fits within the scope of EBRAINS. The submission generates a curation ID allowing us to track the case.
93 93  
94 -This form collects preliminary information about your data, allowing us to assess whether the dataset fits within the scope of EBRAINS. The submission generates a curation ID allowing us to track the case.
95 95  
70 +[[image:https://lh6.googleusercontent.com/yw442oS6BwZOlY-_0BoVxyCW3DrdcJ5ogCes92iOD16_rgNEVk56aNMDaVWXFfBLYv24bHzmGgBF9wg0szjH70xzuRTqxoQAeuy3knNO7axCHoyZDXwtyTcMgFnYwbOYxOT29LK-zchrUKLW6Mle93kOkQ=s2048||height="94px;" width="94px;"]]**Fill in the [[Ethics and Regulatory compliance form>>https://nettskjema.no/a/224765]]**. This form collects the necessary information needed for us to evaluate whether we can ethically and legally share the data via EBRAINS.
96 96  
97 -[[image:https://lh6.googleusercontent.com/yw442oS6BwZOlY-_0BoVxyCW3DrdcJ5ogCes92iOD16_rgNEVk56aNMDaVWXFfBLYv24bHzmGgBF9wg0szjH70xzuRTqxoQAeuy3knNO7axCHoyZDXwtyTcMgFnYwbOYxOT29LK-zchrUKLW6Mle93kOkQ=s2048||height="94px;" width="94px;"]]**Fill in the [[Ethics and Regulatory compliance form>>https://nettskjema.no/a/224765]]**.
98 98  
99 -This form collects the necessary information needed for us to evaluate whether we can ethically and legally share the data via EBRAINS.
100 -
101 -See below for information about the ethical and legal aspects concerning sharing of human subject data.
102 -
103 -
104 104  ==== **2. Upload data ** ====
105 105  
106 106  
107 -[[image:https://lh5.googleusercontent.com/sieKO-kW8O18iPaUyonwyo4UfHBmtc2E9BDnjbx52j6J_uGmm-OzGAo7sloMk3sYwKa6QW3hYQsOA9N4H7uGQpca088Wrk0Nurpt_J3B0-NSbcaPNdZIh21otQcG6jnAxLGiKoEvkTyaDGTMk3fu7me8mQ=s2048||height="94px;" width="94px;"]]**Ensure data is structured consistently prior to upload. **
76 +[[image:https://lh5.googleusercontent.com/sieKO-kW8O18iPaUyonwyo4UfHBmtc2E9BDnjbx52j6J_uGmm-OzGAo7sloMk3sYwKa6QW3hYQsOA9N4H7uGQpca088Wrk0Nurpt_J3B0-NSbcaPNdZIh21otQcG6jnAxLGiKoEvkTyaDGTMk3fu7me8mQ=s2048||height="94px;" width="94px;"]]**Ensure data is structured consistently prior to upload. **We look for organized data, not organized according to our standard. This is to support the broadest degree of sharing possible. We do however require that the data is organized in a consistent and precise manner. Please see our// //[[collection of guidelines on data organization>>https://drive.ebrains.eu/smart-link/25299f04-c4e5-4028-8f5f-3b8208f9a532/]] for further guidance.
108 108  
109 -We look for organized data, not organized according to our standard. This is to support the broadest degree of sharing possible. We do however require that the data is organized in a consistent and precise manner. Please see our// //[[collection of guidelines on data organization>>https://drive.ebrains.eu/smart-link/25299f04-c4e5-4028-8f5f-3b8208f9a532/]] for further guidance.
110 -
111 111  [[image:https://lh5.googleusercontent.com/EWtYwfVlbeC-jqPasgmzidqc50GrkKIEgwXeUeql8aaMHIukmFdWEy0nufVWWATbxDDK3XwwZEDmASrbpCsBk1u0HpAd8x4ZgAMsMPRcWyrb9etlV6FgKE_QN2e6SqKxHE0rzkR8uI1rRW_5z21TFGYVnw=s2048||height="91px;" width="91px;"]]**Upload data to EBRAINS Storage, either using a drag-and-drop solution (opt. 1) or an interactive python script (opt. 2).**
112 112  
113 113  //Opt. 1. //For smaller datasets with a reasonable amount of files, we recommend using the Collab-Bucket solution (drag-and-drop). A Collab Bucket must first be assigned to a dataset, which happens when a datasets is accepted for sharing.
... ... @@ -120,12 +120,15 @@
120 120  If a data collection is already uploaded elsewhere, we may link to the already existing repository.
121 121  
122 122  
90 +
91 +|(% style="width:369px" %) |(% style="width:1467px" %)
92 +
123 123  ==== **3. Submit metadata** ====
124 124  
125 125  
126 -[[image:https://lh5.googleusercontent.com/WS4T2LhF9znWWChn3Z550agLrrb-KTWdYVsJSv0lh4cGjKbjuN1WV68WER9xkYqi1UqN7KYZz7bImYz3_TpOuTuvma7T192QUiUZoyJVPk1fj5NSDSQh_kpIeBufAOdDtsDRpPKK_P5EDPqRCTAaOTNyCw=s2048||height="91px;" width="91px;"]]**Submit metadata using the **[[EBRAINS Wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]** (opt. 1), or through direct interaction with the Knowledge Graph (opt. 2) **
96 +[[image:https://lh5.googleusercontent.com/WS4T2LhF9znWWChn3Z550agLrrb-KTWdYVsJSv0lh4cGjKbjuN1WV68WER9xkYqi1UqN7KYZz7bImYz3_TpOuTuvma7T192QUiUZoyJVPk1fj5NSDSQh_kpIeBufAOdDtsDRpPKK_P5EDPqRCTAaOTNyCw=s2048||height="91px;" width="91px;"]]**Submit metadata using our **[[EBRAINS Metadata wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]** (opt. 1), or through direct interaction with the Knowledge Graph (opt. 2) **
127 127  
128 -//Opt. 1.// Manually submit the minimal required metadata via the [[EBRAINS Wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]. The minimal required metadata covers extended bibliographic information necessary to publish your dataset on EBRAINS. The submitted information, including uploaded files, will be sent to the Curation team automatically
98 +//Opt. 1.// Manually submit the minimal required metadata via the [[EBRAINS Metadata wizard>>https://ebrains-metadata-wizard.apps.hbp.eu/]]. The minimal required metadata covers extended bibliographic information necessary to publish your dataset on EBRAINS. The submitted information, including uploaded files, will be sent to the Curation team automatically
129 129  
130 130  //Opt. 2.// To go beyond the minimal required metadata, you can directly interact with the Knowledge Graph (KG) in your private space. Within the private space, you can upload metadata and interact with them, moreover you can connect your metadata to existing publicly accessible entries. Access to your private space is granted upon the initiation of the curation process. You can access your private space via:
131 131  
... ... @@ -136,29 +136,29 @@
136 136  Datasets published through the EBRAINS Knowledge Graph have to be registered using **openMINDS compliant metadata** delivered as JSON-LD files. See this summary table for an overview of [[the minimally required openMINDS properties for publishing>>https://drive.ebrains.eu/lib/47995dbc-f576-4008-a76c-eefbfd818529/file/ebrains-minimum-required-metadata.xlsx]] on EBRAINS.
137 137  
138 138  
109 +**The openMINDS metadata framework**
110 +
111 +openMINDS (open Metadata Initiative for Neuroscience Data Structures) is a community-driven, open-source metadata framework for graph database systems, such as the EBRAINS Knowledge Graph. It is composed of linked metadata models, libraries of serviceable metadata instances, and supportive tooling ([[openMINDS Python>>url:https://pypi.org/project/openMINDS/]], openMINDS Matlab). For exploring the openMINDS schemas, go to the [[HTML documentation>>url:https://humanbrainproject.github.io/openMINDS/]]. For a full overview of the framework, go to [[the openMINDS collab>>url:https://wiki.ebrains.eu/bin/view/Collabs/openminds/]] or the [[GitHub repository>>https://github.com/HumanBrainProject/openMINDS]].
112 +
113 +For feedback, requests, or contributions, please get in touch with the openMINDS development team via
114 +
115 +* the support-email: [[openminds@ebrains.eu>>path:mailto:openminds@ebrains.eu]]
116 +* the [[GitHub issue tracker>>url:https://github.com/HumanBrainProject/openMINDS/issues]]
117 +* the INCF NeuroStars [[openMINDS Community Forum>>url:https://neurostars.org/t/openminds-community-forum-virtual/20156]]
118 +
139 139  ==== **4. Write a Data Descriptor ** ====
140 140  
141 -[[image:https://lh4.googleusercontent.com/lMYEKOXzejbBydOdotWWteXQo7j363xRyntBGjcPZVEdtIU1CJYX7q1STpdr2JPZK4hpWWXk20UlkUOqDGL5kX6vnQVBSdrfUo6EGfXOwpuGq1Uygv0tTZJ0lRO6voJvg56QC2mufvjAcRXGfAKFOjtc6w=s2048||height="94px;" width="94px;"]]**Write a data descriptor by filling in **[[this template>>https://drive.ebrains.eu/f/a2e07c95b1a54090bbbc/?dl=1]]** . **
142 142  
143 -The Data Descriptor is a document helping others interpret and reuse (and prevent misuse) of your data, and is critical to achieve a basic level of FAIR. The document will be uploaded in the repository of the data, shared as a PDF. 
122 +[[image:https://lh4.googleusercontent.com/lMYEKOXzejbBydOdotWWteXQo7j363xRyntBGjcPZVEdtIU1CJYX7q1STpdr2JPZK4hpWWXk20UlkUOqDGL5kX6vnQVBSdrfUo6EGfXOwpuGq1Uygv0tTZJ0lRO6voJvg56QC2mufvjAcRXGfAKFOjtc6w=s2048||height="94px;" width="94px;"]]**Write a data descriptor by filling in **[[this template>>https://drive.ebrains.eu/f/a2e07c95b1a54090bbbc/?dl=1]]** . **The Data Descriptor is a document helping others interpret and reuse (and prevent misuse) of your data, and is critical to achieve a basic level of FAIR. The document will be uploaded in the repository of the data, shared as a PDF. 
144 144  
145 -See our infographic about the data descriptor for inspiration or guidance.
146 146  
147 -Check out previous examples in the KG Search. See e.g., the data descriptor for the dataset "[[Anterogradely labeled axonal projections from the orbitofrontal cortex in rat>>https://doi.org/10.25493/2MX9-3XF]]".
125 +Check out previous examples in the KG Search! See e.g., the data descriptor for the dataset "[[Anterogradely labeled axonal projections from the orbitofrontal cortex in rat>>https://doi.org/10.25493/2MX9-3XF]]".
148 148  
149 149  Journal publications sufficiently describing the shared data, such as made available through [[Nature Scientific Data>>http://www.nature.com/sdata/about]], [[Elsevier Data in Brief>>http://www.journals.elsevier.com/data-in-brief/]], [[BMC Data note>>https://bmcresnotes.biomedcentral.com/submission-guidelines/preparing-your-manuscript/data-note]] and more, can replace the EBRAINS Data Descriptor.
150 150  
151 -(% class="box floatinginfobox" id="data-descriptor-infographic" %)
152 -(((
153 -(% style="text-align:center" %)
154 -//Download our infographic: //
155 -//The EBRAINS Data//
156 -//Descriptor at a glance//
157 -// //
158 -[[[[image:image-20230324171109-1.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]
159 -
160 -)))
161 161  
130 +|(% style="width:175px" %)[[[[image:image-20230324171109-1.png||height="154" width="109"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]|(% style="width:1662px" %)The EBRAINS Data descriptor at-a-glance
131 +
162 162  ==== **5. Preview and publish ** ====
163 163  
164 164  
... ... @@ -167,24 +167,20 @@
167 167  
168 168  ----
169 169  
170 -==== **Sharing human subject data ** ====
140 +==== **Sharing human data ** ====
171 171  
172 172  (% class="box floatinginfobox" %)
173 173  (((
174 -**Human subject data that can be shared on EBRAINS:**
175 -// //
176 -// - Post-mortem data//
177 -// - Aggregated data//
178 -// - Strongly pseudonymized or de-identified subject data//
179 -// with a legal basis for sharing (e.g. Informed Consent)//
180 -// //
144 +**Human subject data that can be shared on EBRAINS consists of:**
181 181  
182 -(% class="small" %)
183 -//If you have human data that does not qualify as any of the above,//
184 -//please [[get in touch>>https://www.ebrains.eu/contact/]] and we will clarify the available options.//
146 +- Post-mortem data
147 +- Aggregated data
148 +- Strongly pseudonymized or de-identified subject data with a legal basis for sharing (e.g. Informed Consent)
149 +
150 +(% class="small" %)//If you have human data that does not classify as any of the above, please get in touch and we will clarify the available options. //
185 185  )))
186 186  
187 -Human subject data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we need to assess this is collected via our [[Ethics and Regulatory Compliance Survey>>https://nettskjema.no/a/224765]].
153 +Human data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we need to assess this is collected via our [[Ethics and Regulatory Compliance Survey>>https://nettskjema.no/a/224765]].
188 188  
189 189  Post-mortem and aggregated human data can be shared openly, given direct identifiers in the metadata are removed. Strongly pseudonymized and de-identified data can be shared via the Human Data Gateway (HDG).
190 190  
... ... @@ -209,33 +209,25 @@
209 209  
210 210  === Step by Step - Software ===
211 211  
212 -[[[[image:Screenshot 2023-06-06 1122082.png||alt="swc-flow.png" height="136" width="637"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]]
178 +[[[[image:swc-flow-no-header.png||alt="swc-flow.png"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]]
213 213  
214 -~1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions, you will find the links to your software and software version entries in the Knowledge Graph.
180 +~1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions you will find the links to your software and software version entries in the Knowledge Graph.
215 215  
216 216  2. Enter the metadata of your software in your private space of the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided by the curator. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary.
217 217  
218 -3. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.
184 +3. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.[[[[image:Thumb.png||alt="EBRAINS-Share-Software.pdf" height="315" style="float:right" width="215"]]>>attach:EBRAINS-Share-Software.pdf]]
219 219  
220 220  If you want to add a new version to an already curated software, please request this via the [[curation request form>>https://nettskjema.no/a/277393]].
221 221  
222 -For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic below.
188 +For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic.
223 223  
224 -(% style="text-align: right;" %)
225 -==== //Software curation at a glance          //[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] ====
226 226  
227 -----
228 228  
229 -== **The openMINDS metadata framework** ==
230 230  
231 -openMINDS (open Metadata Initiative for Neuroscience Data Structures) is a community-driven, open-source metadata framework for graph database systems, such as the EBRAINS Knowledge Graph. It is composed of linked metadata models, libraries of serviceable metadata instances, and supportive tooling ([[openMINDS Python>>url:https://pypi.org/project/openMINDS/]], openMINDS Matlab). For exploring the openMINDS schemas, go to the [[HTML documentation>>url:https://humanbrainproject.github.io/openMINDS/]]. For a full overview of the framework, go to [[the openMINDS collab>>url:https://wiki.ebrains.eu/bin/view/Collabs/openminds/]] or the [[GitHub repository>>https://github.com/HumanBrainProject/openMINDS]].
232 232  
233 -For feedback, requests, or contributions, please get in touch with the openMINDS development team via
234 234  
235 -* the support-email: [[openminds@ebrains.eu>>path:mailto:openminds@ebrains.eu]]
236 -* the [[GitHub issue tracker>>url:https://github.com/HumanBrainProject/openMINDS/issues]]
237 -* the INCF NeuroStars [[openMINDS Community Forum>>url:https://neurostars.org/t/openminds-community-forum-virtual/20156]]
238 238  
196 +
239 239  ----
240 240  
241 241  == **The curation team: meet the curators** ==
... ... @@ -254,7 +254,7 @@
254 254  
255 255  (% class="small" %)Curation Scientist
256 256  Neuroscience (PhD)(%%)
257 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Behavioral neuroscience and microscopy**
215 +(% class="small" style="color:#4a5568" %)**Behavioral neuroscience and microscopy**
258 258  )))|(% style="width:303px" %)(((
259 259  [[image:Camilla.jpg||alt="My project.jpg" height="209" width="167"]]
260 260  
... ... @@ -263,7 +263,7 @@
263 263  (% class="small" %)Curation Scientist,
264 264  Phd Student
265 265  Neuroscience (M. Sc.)(%%)
266 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and data integration**
224 +(% class="small" style="color:#4a5568" %)**Neuroanatomy and data integration**
267 267  )))|(% style="width:303px" %)(((
268 268  [[image:My project (1).jpg||height="209" width="167"]]
269 269  
... ... @@ -272,7 +272,7 @@
272 272  (% class="small" %)Curation Scientist,
273 273  Phd Student
274 274  Neuroscience (M. Sc.)(%%)
275 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and structural connectivity**
233 +(% class="small" style="color:#4a5568" %)**Neuroanatomy and structural connectivity**
276 276  )))|(% style="width:303px" %)(((
277 277  [[image:My project1.jpg||height="209" width="167"]]
278 278  
... ... @@ -280,7 +280,7 @@
280 280  
281 281  (% class="small" %)Curation Scientist
282 282  Neurocognitive Psychology (M. Sc.)(%%)
283 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroimaging **
241 +(% class="small" style="color:#4a5568" %)**Neuroimaging **
284 284  )))
285 285  
286 286  |(% style="width:303px" %)(((
... ... @@ -291,7 +291,7 @@
291 291  (% class="small" %)Curation Scientist,
292 292  Phd Student
293 293  Neuroscience (M. Sc.)(%%)
294 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and brain atlases**
252 +(% class="small" style="color:#4a5568" %)**Neuroanatomy and brain atlases**
295 295  )))| | |
296 296  
297 297  
... ... @@ -305,8 +305,8 @@
305 305  (% class="small" %)Curation Scientist,
306 306  Phd Student
307 307  Sensors and Cognitive Psychology (M. Sc.)(%%)
308 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Human-Computer Interaction**
309 -)))|(% style="width:328px" %)(((
266 +(% class="small" style="color:#4a5568" %)**Human-Computer Interaction**
267 +)))|(% style="width:303px" %)(((
310 310  
311 311  
312 312  
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323 323  
324 324  (% class="small" %)Knowledge Systems Engineer
325 325  Dr. rer. nat. (Systems Neuroscience)(%%)
326 -(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
327 -)))|(% style="width:321px" %) |(% style="width:324px" %)
284 +(% class="small" style="color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
285 +)))|(% style="width:303px" %) |
328 328  
329 329  ----
330 330  
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331 331  == **Add practical value to your shared data, model or software** ==
332 332  
333 333  
292 +==== **Add a tutorial or learning resource ** ====
293 +
294 +(% class="wikigeneratedid" id="H-LearningresourceA05Binformation5D" %)
295 +(% style="color:#000000" %)//More information will follow//
296 +
297 +
298 +==== **Create a workflow** ====
299 +
300 +(% class="wikigeneratedid" id="H-Workflows5Binformation5D" %)
301 +(% style="color:#000000" %)//More information will follow//
302 +
334 334  ----
335 335  
336 336  === **Showcase shared data, models or software in other services** ===
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355 355  
356 356  ----
357 357  
358 -==== **Add a tutorial or learning resource ** ====
359 -
360 -(% class="wikigeneratedid" id="H-LearningresourceA05Binformation5D" %)
361 -(% style="--darkreader-inline-color:#ffffff; color:#000000" %)//More information will follow//
362 -
363 -
364 -==== **Create a workflow** ====
365 -
366 -(% class="wikigeneratedid" id="H-Workflows5Binformation5D" %)
367 -(% style="--darkreader-inline-color:#ffffff; color:#000000" %)//More information will follow//
368 -
369 -----
370 -
371 371  === **The benefits of sharing data ** ===
372 372  
373 373  By sharing your data via EBRAINS, you gain access to the following benefits:
... ... @@ -376,50 +376,57 @@
376 376  
377 377  
378 378  
379 -We support you to better follow the [[FAIR^^ ^^guiding principles>>https://www.nature.com/articles/sdata201618]] for data management and stewardship{{footnote}}Wilkinson, M., Dumontier, M., Aalbersberg, I. et al. The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3, 160018 (2016). https://doi.org/10.1038/sdata.2016.18 {{/footnote}}.  Publishing data, models or code via EBRAINS will provide you with a citeable [[DataCite DOI>>https://www.doi.org/the-identifier/resources/handbook/]] for your research product.
335 +We support you to better follow the FAIR^^ ^^guiding principles for data management and stewardship{{footnote}}Wilkinson, M., Dumontier, M., Aalbersberg, I. et al. The FAIR Guiding Principles for scientific data management and stewardship. Sci Data 3, 160018 (2016). https://doi.org/10.1038/sdata.2016.18 {{/footnote}}.  Publishing data, models or code via EBRAINS will provide you with a citeable [[DataCite DOI>>https://www.doi.org/the-identifier/resources/handbook/]] for your research product.
380 380  
337 +
381 381  ----
382 382  
340 +=== ===
341 +
383 383  === **Frequently asked questions ** ===
384 384  
385 385  (((
386 -==== ====
345 +==== ====
387 387  
388 388  (((
389 ->Is the curation process time consuming and difficult?
348 +>The curation process is time consuming and difficult
390 390  )))
391 391  )))
392 392  
393 -
394 394  (% class="wikigeneratedid" id="HHowcanIshareA0models3F" %)
395 -No, if communication is on a regular basis, we are able to finish curation within two weeks. Publishing your data naturally takes some effort but we will support you as much as possible.
353 +Publishing your data naturally takes some time and effort but we will support you as much as possible. If communication is on a regular basis, we are able to finish basic curation - from the initial contact to dataset release - within two weeks.
396 396  
397 ->Is sharing my data also beneficial for me or only for others?
355 +>Sharing my data is not beneficial for me - only for others
398 398  
399 399  
400 400  When you publish your data via EBRAINS, we provide comprehensive data management support and safe long term storage - all free of charge. Additionally, your data can be cited, just like a scientific journal article. Sharing your data may even lead to new funding opportunities. Many funders specifically support projects that are part of the “Open Science” initiative.
401 401  
402 ->Can my data be too insignificant to share?
360 +>My data is too insignificant to share
403 403  
404 404  
405 -No, there is no such thing as insignificant data. Data that is considered insignificant for a given topic, may have great significance for another. By making “insignificant” data publicly available, other researchers may find something interesting that was off-topic for your own purposes.
363 +There is no such thing as insignificant data. Data that is considered insignificant for a given topic, may have great significance for another. By making “insignificant” data publicly available, other researchers may find something interesting that was off-topic for your own purposes.
406 406  
407 ->Can my data be easily misused if I share it?
365 +>My data can easily be misused if I share it with the world
408 408  
409 409  
410 -No, your data will be covered by a Creative Commons license of your choice. There are a variety of licenses available, enabling you to prevent use for specific purposes, e.g. commercial use.
368 +Your data will be covered by a Creative Commons license of your choice. There are a variety of licenses available, enabling you to prevent use for specific purposes, e.g. commercial use.
411 411  
412 ->Can I share my data before my paper is published?
370 +>I don't think I'm allowed to share my data
413 413  
414 414  
415 -Yes, if you do not want to share your data before publishing the results in an article, you can publish your dataset with an embargo status. This will make it possible to find information about the data without making the data itself available, and give you a citeable DOI.
373 +Many institutions are still very careful about what can be shared and how, but the situation is constantly evolving. As a researcher providing data, you will be asked to fill out an ethics compliance survey which survey to ensure that data published through the EBRAINS platform has been collected according to EU regulations. We are working on solutions for sharing anonymised human data that complies with GDPR standards to protect the identity of research subjects.
416 416  
417 ->Can I lose my competitive edge if I share my data before I publish the associated paper?
375 +>I can't share my data before my paper is published
418 418  
419 419  
420 -No, publishing your data does not mean that others can use it however they want. Use of your data will require citation, and by choosing an appropriate Creative Commons licence you decide what others are allowed to do with it. If you still feel worried, you can publish your data under embargo, and in this way delay the date of data release, but still make it possible for others to find the information about the data.
378 +If you do not want to share your data before publishing the results in an article, you can publish your dataset with an embargo status. This will make it possible to find information about the data without making the data itself available, and give you a citeable DOI.
421 421  
380 +>If I share my data before I publish the associated paper, I will lose my competitive edge
422 422  
382 +
383 +Publishing your data does not mean that others can use it however they want. Use of your data will require citation, and by choosing an appropriate Creative Commons licence you decide what others are allowed to do with it. If you still feel worried, you can publish your data under embargo, and in this way delay the date of data release, but still make it possible for others to find the information about the data.
384 +
385 +
423 423  ----
424 424  
425 425  == Contact ==
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