Changes for page data-curation-copy
Last modified by eapapp on 2023/07/04 16:46
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... ... @@ -34,10 +34,8 @@ 34 34 Have you already published your data somewhere else? You can increase the exposure and impact of your shared dataset by also listing it on EBRAINS. 35 35 36 36 37 -(% class="box" style="text-align: center; font-size: 1.2em" %) 38 -((( 39 -Search existing data, models and software in the [[EBRAINS Knowledge Graph >>https://kg.ebrains.eu/search/?facet_type[0]=Dataset]] 40 -))) 37 +(% style="text-align: center;" %) 38 +Search existing data, models and software in [[the EBRAINS Knowledge Graph Search>>https://kg.ebrains.eu/search/?facet_type[0]=Dataset]] 41 41 42 42 43 43 EBRAINS accepts data from all modalities and from all species, as well as models, software, web services and metadata models (collectively referred to as research products) for sharing. You'll find detailed information about how to share each research product below. ... ... @@ -82,9 +82,7 @@ 82 82 //with all you need to know// 83 83 //to share data on EBRAINS: // 84 84 // // 85 -[[[[image:image-20230324171114-2.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]] 86 - 87 - 83 +[[[[image:image-20230324171114-2.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]// 88 88 ))) 89 89 90 90 ... ... @@ -150,17 +150,9 @@ 150 150 151 151 Journal publications sufficiently describing the shared data, such as made available through [[Nature Scientific Data>>http://www.nature.com/sdata/about]], [[Elsevier Data in Brief>>http://www.journals.elsevier.com/data-in-brief/]], [[BMC Data note>>https://bmcresnotes.biomedcentral.com/submission-guidelines/preparing-your-manuscript/data-note]] and more, can replace the EBRAINS Data Descriptor. 152 152 153 -(% class="box floatinginfobox" id="data-descriptor-infographic" %) 154 -((( 155 -(% style="text-align:center" %) 156 -//Download our infographic: // 157 -//The EBRAINS Data// 158 -//Descriptor at a glance// 159 -// // 160 -[[[[image:image-20230324171109-1.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]] 161 - 162 -))) 149 +==== [[[[image:image-20230324171109-1.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]//The EBRAINS Data descriptor at-a-glance// ==== 163 163 151 + 164 164 ==== **5. Preview and publish ** ==== 165 165 166 166 ... ... @@ -174,16 +174,12 @@ 174 174 (% class="box floatinginfobox" %) 175 175 ((( 176 176 **Human subject data that can be shared on EBRAINS:** 177 -// // 178 -// - Post-mortem data// 179 -// - Aggregated data// 180 -// - Strongly pseudonymized or de-identified subject data// 181 -// with a legal basis for sharing (e.g. Informed Consent)// 182 -// // 183 183 184 -(% class="small" %) 185 -//If you have human data that does not qualify as any of the above,// 186 -//please [[get in touch>>https://www.ebrains.eu/contact/]] and we will clarify the available options.// 166 +- Post-mortem data 167 +- Aggregated data 168 +- Strongly pseudonymized or de-identified subject data with a legal basis for sharing (e.g. Informed Consent) 169 + 170 +(% class="small" %)//If you have human data that does not classify as any of the above, please get in touch and we will clarify the available options. // 187 187 ))) 188 188 189 189 Human subject data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we need to assess this is collected via our [[Ethics and Regulatory Compliance Survey>>https://nettskjema.no/a/224765]]. ... ... @@ -211,25 +211,20 @@ 211 211 212 212 === Step by Step - Software === 213 213 198 +[[[[image:Screenshot 2023-06-06 1122082.png||alt="swc-flow.png" height="136" width="637"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]] 214 214 215 -(% class="box floatinginfobox" id="software-curation-infographic" %) 216 -((( 217 -(% style="text-align:center" %) 218 -//Software curation at a glance// 219 -// // 220 -[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] 221 -))) 200 +~1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions, you will find the links to your software and software version entries in the Knowledge Graph. 222 222 223 - (%style="margin-left:15px"%)[[[[image:Screenshot2023-06-061122082.png||alt="swc-flow.png"height="136"width="637"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer"target="_blank"]]202 +2. Enter the metadata of your software in your private space of the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided by the curator. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary. 224 224 225 -1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions, you will find the links to your software and software version entries in the Knowledge Graph. 226 -1. Enter the metadata of your software in your private space of the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided by the curator. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary. 227 -1. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community. 204 +3. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community. 228 228 229 229 If you want to add a new version to an already curated software, please request this via the [[curation request form>>https://nettskjema.no/a/277393]]. 230 230 231 -For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic on theright.208 +For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic below. 232 232 210 +(% style="text-align: right;" %) 211 +==== //Software curation at a glance //[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] ==== 233 233 234 234 ---- 235 235 ... ... @@ -313,7 +313,7 @@ 313 313 Phd Student 314 314 Sensors and Cognitive Psychology (M. Sc.)(%%) 315 315 (% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Human-Computer Interaction** 316 -)))|(% style="width:3 28px" %)(((295 +)))|(% style="width:303px" %)((( 317 317 318 318 319 319 ... ... @@ -321,12 +321,17 @@ 321 321 322 322 323 323 303 + 304 + 305 + 306 + 307 + 324 324 **Lyuba Zehl** 325 325 326 326 (% class="small" %)Knowledge Systems Engineer 327 327 Dr. rer. nat. (Systems Neuroscience)(%%) 328 328 (% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis** 329 -)))|(% style="width:3 21px" %) |(%style="width:324px" %)313 +)))|(% style="width:303px" %) | 330 330 331 331 ---- 332 332 ... ... @@ -388,40 +388,44 @@ 388 388 ==== ==== 389 389 390 390 ((( 391 -> Is the curation process time consuming and difficult?375 +>The curation process is time consuming and difficult 392 392 ))) 393 393 ))) 394 394 395 - 396 396 (% class="wikigeneratedid" id="HHowcanIshareA0models3F" %) 397 - No,if communication is on a regular basis, we are able to finish curationwithintwoweeks.Publishingyourdatanaturally takessomeeffortbutwe will supportyou as muchas possible.380 +Publishing your data naturally takes some time and effort but we will support you as much as possible. If communication is on a regular basis, we are able to finish basic curation - from the initial contact to dataset release - within two weeks. 398 398 399 -> Is sharing my dataalso beneficial for meoronly for others?382 +>Sharing my data is not beneficial for me - only for others 400 400 401 401 402 402 When you publish your data via EBRAINS, we provide comprehensive data management support and safe long term storage - all free of charge. Additionally, your data can be cited, just like a scientific journal article. Sharing your data may even lead to new funding opportunities. Many funders specifically support projects that are part of the “Open Science” initiative. 403 403 404 -> Can my databetoo insignificant to share?387 +>My data is too insignificant to share 405 405 406 406 407 - No, there is no such thing as insignificant data. Data that is considered insignificant for a given topic, may have great significance for another. By making “insignificant” data publicly available, other researchers may find something interesting that was off-topic for your own purposes.390 +There is no such thing as insignificant data. Data that is considered insignificant for a given topic, may have great significance for another. By making “insignificant” data publicly available, other researchers may find something interesting that was off-topic for your own purposes. 408 408 409 -> Can my databeeasily misused if I share it?392 +>My data can easily be misused if I share it with the world 410 410 411 411 412 - No, your data will be covered by a Creative Commons license of your choice. There are a variety of licenses available, enabling you to prevent use for specific purposes, e.g. commercial use.395 +Your data will be covered by a Creative Commons license of your choice. There are a variety of licenses available, enabling you to prevent use for specific purposes, e.g. commercial use. 413 413 414 -> Can I share my databefore my paper is published?397 +>I don't think I'm allowed to share my data 415 415 416 416 417 - Yes,ifyoudonot wanttoshareyourdatabefore publishing theresultsinanarticle,youcan publish your datasetwith an embargostatus.Thiswill make itpossibleto findinformation aboutthedatawithout makingthedataitselfavailable,and giveua citeableDOI.400 +Many institutions are still very careful about what can be shared and how, but the situation is constantly evolving. As a researcher providing data, you will be asked to fill out an ethics compliance survey which survey to ensure that data published through the EBRAINS platform has been collected according to EU regulations. We are working on solutions for sharing anonymised human data that complies with GDPR standards to protect the identity of research subjects. 418 418 419 -> CanIlose mycompetitiveedge if Ishare my data beforeIpublishtheassociatedpaper?402 +>I can't share my data before my paper is published 420 420 421 421 422 - No,publishingyourdata doesnotmeanhatotherscan use ithowevertheywant. Use ofyour datawill requirecitation, andby choosingan appropriateCreative Commonslicenceyou decide whatothersare allowedto do with it. If you still feel worried, you can publish your dataunderembargo,and in thisway delaythe date of data release,butstill make it possiblefor others to findtheinformation about the data.405 +If you do not want to share your data before publishing the results in an article, you can publish your dataset with an embargo status. This will make it possible to find information about the data without making the data itself available, and give you a citeable DOI. 423 423 407 +>If I share my data before I publish the associated paper, I will lose my competitive edge 424 424 409 + 410 +Publishing your data does not mean that others can use it however they want. Use of your data will require citation, and by choosing an appropriate Creative Commons licence you decide what others are allowed to do with it. If you still feel worried, you can publish your data under embargo, and in this way delay the date of data release, but still make it possible for others to find the information about the data. 411 + 412 + 425 425 ---- 426 426 427 427 == Contact ==