Changes for page data-curation-copy
Last modified by eapapp on 2023/07/04 16:46
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... ... @@ -25,6 +25,7 @@ 25 25 26 26 >The EBRAINS curation process involves organising and annotating neuroscientific data to make the data discoverable and reusable. 27 27 28 + 28 28 Behind this process is the EBRAINS Curation team. Our mandate is to support you in sharing your data in line with the [[**FAIR principles**>>https://www.go-fair.org/fair-principles/]], whether you choose to describe only the key aspects of your data, or can invest in adding more detailed metadata. 29 29 30 30 ... ... @@ -46,6 +46,8 @@ 46 46 47 47 [[image:image-20230326054341-1.png]] 48 48 50 +==== ==== 51 + 49 49 ==== **1. Provide some general information about your dataset** ==== 50 50 51 51 The [[Curation request form>>https://nettskjema.no/a/277393#/]] collects preliminary information about your data, allowing us to assess whether the dataset fits within the scope of EBRAINS. The submission generates a curation ID allowing us to track the case. ... ... @@ -154,17 +154,17 @@ 154 154 155 155 ---- 156 156 157 -== ** Resources for researchers looking to share data** ==160 +== **Information and resources for researchers looking to share data** == 158 158 159 159 Below you can find some resources that can come in handy if you are looking to share data via EBRAINS, or in general. 160 160 161 161 ---- 162 162 163 -=== ** WhyshouldIsharedata?** ===166 +=== **The benefits of sharing data ** === 164 164 165 -(% style="color:#e 74c3c"%)[EDITrequired]168 +(% style="color:#000000" %)Sharing your data, models or code (research products) via EBRAINS makes it discoverable amongst other research products available in the (%%)[[(% style="color:#000000" %)EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]](%%). This is made possible by the highly flexible metadata framework describing neuroscience data in detail. 166 166 167 -(% style="color:# e74c3c" %)Sharing your data, models or code (research products) viaEBRAINSmakesit discoverableamongst otherresearch productsavailable in the [[EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]]. This is made possible bythe highly flexiblemetadata framework describing neuroscience data in detail. EBRAINS is gradually implementing interconnected tools and analysis workflows developed in the Human Brain Project (HBP) to further enhance the output from adding your dataset to the database.170 +(% style="color:#000000" %)EBRAINS is gradually implementing interconnected tools and analysis workflows developed in the Human Brain Project (HBP) to further enhance the output from adding your dataset to the database. 168 168 169 169 170 170 By sharing your data via EBRAINS, you gain access to the following benefits: ... ... @@ -186,28 +186,18 @@ 186 186 187 187 ---- 188 188 189 -=== ** Useful informationaboutsharingofexperimental data on EBRAINS ** ===192 +=== **At a glance: "Sharing experimental data on EBRAINS" ** === 190 190 191 191 192 -|(% style="width: 593px" %)(((195 +|(% style="width:439px" %)((( 193 193 [[[[image:image-20230324171114-2.png]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]] 194 -)))|(% style="width: 1240px" %)(((195 -[[[[image:image-20230324171109-1.png]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]] 196 -))) 197 -|(% style="width: 593px" %)//Collection of useful information for researchers looking to share experimental data on EBRAINS.//|(% style="width:1240px" %)//The EBRAINS data descriptor//197 +)))|(% style="width:461px" %)((( 198 +[[[[image:image-20230324171109-1.png||height="358" width="254"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]] 199 +)))|(% style="width:416px" %)[[[[image:image-20230330120354-1.png||height="355" width="252"]]>>https://drive.ebrains.eu/f/707147a883b94fae8e69/]] 200 +|(% style="width:439px" %)//Collection of useful information for researchers looking to share experimental data on EBRAINS.//|(% style="width:461px" %)//The EBRAINS data descriptor: a general overview //|(% style="width:416px" %)//Introduction to data organization: A [[collection of guidelines>>https://drive.ebrains.eu/smart-link/25299f04-c4e5-4028-8f5f-3b8208f9a532/]] on how to organise files and folders to ensure consistency and reproducibility in the future. // 198 198 199 199 ---- 200 200 201 -=== **Introduction to data organisation ** === 202 - 203 -Have you ever experienced not being able to find a file that you were sure you had somewhere? We have prepared a [[collection of guidelines>>https://drive.ebrains.eu/smart-link/25299f04-c4e5-4028-8f5f-3b8208f9a532/]] and [[advice>>https://drive.ebrains.eu/lib/f5cf4964-f095-49bd-8c34-e4ffda05a497/file/DataOrganisation.zip]] on how to organise files and folders to ensure consistency and reproducibility in the future. 204 - 205 -* Why is data organisation important? 206 -* How to organise my data repository? 207 -* What is a Data Descriptor and why do I need one? 208 - 209 ----- 210 - 211 211 === **Integrate your data in the EBRAINS atlas services** === 212 212 213 213 EBRAINS supports viewers for a variety of data, and is continuously looking to improve the services for visualising data. For 2D histology image data that is registered to an EBRAINS supported brain atlas, the data and the overlying atlas plates can be uploaded to the LocaliZoom viewer. See for example the [[LocaliZoom links available for this dataset>>https://doi.org/10.25493/T686-7BX]] as an example. ... ... @@ -221,8 +221,6 @@ 221 221 ((( 222 222 ==== ==== 223 223 224 -> 225 - 226 226 ((( 227 227 >The curation process is time consuming and difficult 228 228 )))
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