Changes for page data-curation-copy

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edited by ingrreit
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To version 58.1
edited by ingrreit
on 2023/04/25 17:32
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21 21  
22 22  == **The EBRAINS curation process** ==
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25 +(((
26 +EBRAINS accepts **experimental data,** of all modalities and from all species, **models**, **software**, **web services **and **metadata models**. You'll find detailed information about each research product below.
27 +)))
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24 24  In EBRAINS, multimodal and heterogenous neuroscience data, models and software are categorised and described in a standardised manner so that they can be effectively searched, compared, and analysed. This effort is referred to as curation. 
25 25  
26 26  >The EBRAINS curation process involves organising and annotating neuroscientific data to make the data discoverable and reusable.
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27 27  
28 28  Behind this process is the EBRAINS Curation team. Our mandate is to support you in sharing your data in line with the [[**FAIR principles**>>https://www.go-fair.org/fair-principles/]], whether you choose to describe only the key aspects of your data, or can invest in adding more detailed metadata.
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31 -(% style="color:#e74c3c" %)[PLACEHOLDER: ABOUT THE CURATION TEAM]
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38 +**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases.
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35 35  (((
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51 +Curated data, models and software are made available in the [[the EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]]. This makes the data and metadata discoverable in the [[Knowledge Graph Search>>url:https://search.kg.ebrains.eu/]] and programmatically via the [[Knowledge Graph API>>url:https://docs.kg.ebrains.eu/8387ccd27a186dea3dd0b949dc528842/api_endpoints.html]]. The data, models and software are integrated in the EBRAINS Knowledge Graph by interoperable metadata schemas as defined in [[openMINDS>>url:https://github.com/HumanBrainProject/openMINDS/wiki]].
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53 +Data and models are linked to and discoverable via the species-specific [[EBRAINS siibra atlas viewer>>url:https://ebrains.eu/services/atlases/brain-atlases]] by using interoperable metadata schemas as defined in [[SANDS>>url:https://github.com/HumanBrainProject/SANDS/wiki]].
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45 45  ----
46 46  
47 47  === Step by step - Experimental data ===
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151 151  
152 152  ----
153 153  
154 -=== Output / result, when you've completed the curation process, what do you get ===
165 +=== Webservices and metadata models ===
155 155  
156 -Curated data, models and software are made available in the [[the EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]]. This makes the data and metadata discoverable in the [[Knowledge Graph Search>>url:https://search.kg.ebrains.eu/]] and programmatically via the [[Knowledge Graph API>>url:https://docs.kg.ebrains.eu/8387ccd27a186dea3dd0b949dc528842/api_endpoints.html]]. The data, models and software are integrated in the EBRAINS Knowledge Graph by interoperable metadata schemas as defined in [[openMINDS>>url:https://github.com/HumanBrainProject/openMINDS/wiki]].
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168 +(% style="color:#e74c3c; font-size:16px" %)Contact....(% style="color:#4a5568; font-size:16px" %)
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158 -Data and models are linked to and discoverable via the species-specific [[EBRAINS Interactive Atlas Viewer>>url:https://ebrains.eu/services/atlases/brain-atlases]] by using interoperable metadata schemas as defined in [[SANDS>>url:https://github.com/HumanBrainProject/SANDS/wiki]].
170 +----
159 159  
172 +== **The curation team: meet the curators** ==
173 +
174 +[[image:fb6d6429-709e-4f4d-be3b-eab0a46695bd.JPG||height="184" width="137"]]
175 +
176 +**Sophia Pieschnik**
177 +(% class="small" %)Biology (B.Sc.)
178 +Neurocognitive Psychology (M.Sc.)
179 +
160 160  ----
161 161  
162 162  == **Information and resources for researchers looking to share data** ==
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166 166  ----
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189 +=== **Improve your research product ** ===
190 +
191 +==== **Add a tutorial or learning resource to your research product ** ====
192 +
193 +==== (% style="color:#e74c3c" %)- Learning resource [information](%%) ====
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195 +
196 +==== **Create a workflow for .... ? ** ====
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198 +==== (% style="color:#e74c3c" %)- Workflows [information](%%) ====
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200 +----
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168 168  === **The benefits of sharing data ** ===
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170 170  (% style="color:#000000" %)Sharing your data, models or code (research products) via EBRAINS makes it discoverable amongst other research products available in the (%%)[[(% style="color:#000000" %)EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]](%%). This is made possible by the highly flexible metadata framework describing neuroscience data in detail.
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184 184  ----
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186 -(% style="font-family:inherit" %) (% style="color:#1a202c; font-family:inherit; font-size:26px" %)**What can I share on EBRAINS? **
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189 -[[image:image-20230324170829-2.png]]
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191 -
192 -----
193 -
194 194  === **At a glance: "Sharing experimental data on EBRAINS" ** ===
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203 203  
204 204  ----
205 205  
206 -=== **Integrate your data in the EBRAINS atlas services** ===
232 +=== **Integrate your data on EBRAINS with other services** ===
207 207  
208 -EBRAINS supports viewers for a variety of data, and is continuously looking to improve the services for visualising data. For 2D histology image data that is registered to an EBRAINS supported brain atlas, the data and the overlying atlas plates can be uploaded to the LocaliZoom viewer. See for example the [[LocaliZoom links available for this dataset>>https://doi.org/10.25493/T686-7BX]] as an example.
234 +EBRAINS supports further integration for a variety of data, and is continuously looking to increase the number of interoperable services.
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210 -To learn more about how to integrate your data to atlases, check out the [[Atlas services>>https://ebrains.eu/services/atlases#Integratedatatoanatlas]] on ebrains.eu.
236 +* Integrate image data with //the Mio viewer//: (% style="color:#e74c3c" %)[description]
237 +* Integrate atlas-registered 2D image data with //the Localizoom viewer//: (% style="color:#e74c3c" %)[description](%%). See the [[LocaliZoom links available for this dataset>>https://doi.org/10.25493/T686-7BX]] as an example.
238 +* Add your data, models or software to a// Live paper//: (% style="color:#e74c3c" %)[description]
239 +* Integrate your data to //the atlas viewer Siibra//: (% style="color:#e74c3c" %)[description](%%). To learn more about how to integrate your data to atlases, check out the [[Atlas services>>https://ebrains.eu/services/atlases#Integratedatatoanatlas]] on ebrains.eu.
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