Summary

• Page properties (2 modified, 0 added, 0 removed)

Details

Page properties

Author

...	...	@@ -1,1 +1,1 @@
1		-XWiki.ingrreit
	1	+XWiki.spieschnik

Content

...	...	@@ -21,11 +21,6 @@
21	21
22	22	== **The EBRAINS curation process** ==
23	23
24		-(% class="box successmessage" %)
25		-(((
26		-EBRAINS accepts **experimental data,** of all modalities and from all species, **models**, **software**, **web services **and **metadata models**. You'll find detailed information about each research product below.
27		-)))
28		-
29	29	In EBRAINS, multimodal and heterogenous neuroscience data, models and software are categorised and described in a standardised manner so that they can be effectively searched, compared, and analysed. This effort is referred to as curation.
30	30
31	31	>The EBRAINS curation process involves organising and annotating neuroscientific data to make the data discoverable and reusable.
...	...	@@ -32,10 +32,18 @@
32	32
33	33	Behind this process is the EBRAINS Curation team. Our mandate is to support you in sharing your data in line with the [[**FAIR principles**>>https://www.go-fair.org/fair-principles/]], whether you choose to describe only the key aspects of your data, or can invest in adding more detailed metadata.
34	34
	30	+=== About the curation team ===
35	35
	32	+[[image:fb6d6429-709e-4f4d-be3b-eab0a46695bd.JPG||height="184" width="137"]]
	33	+
	34	+**Sophia Pieschnik**
	35	+(% class="small" %)Biology (B.Sc.)
	36	+Neurocognitive Psychology (M.Sc.)
	37	+
	38	+
36	36	(% class="box successmessage" %)
37	37	(((
38		-**Particular needs? Contact us! **The workflows for sharing can be modified for researchers or research groups aiming to frequently publish larger numbers of their research products through EBRAINS. Please contact the curation service team in such cases.
	41	+**Particular needs? Contact us! **The process of sharing data can be modified to fit the needs of researchers and large-scale projects. Contact us if you have such requests and we'll be happy to work with you to find a solution that suits us both.
39	39	)))
40	40
41	41	(% class="box floatinginfobox" %)
...	...	@@ -47,11 +47,9 @@
47	47
48	48
49	49
50		-Curated data, models and software are made available in the [[the EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]]. This makes the data and metadata discoverable in the [[Knowledge Graph Search>>url:https://search.kg.ebrains.eu/]] and programmatically via the [[Knowledge Graph API>>url:https://docs.kg.ebrains.eu/8387ccd27a186dea3dd0b949dc528842/api_endpoints.html]]. The data, models and software are integrated in the EBRAINS Knowledge Graph by interoperable metadata schemas as defined in [[openMINDS>>url:https://github.com/HumanBrainProject/openMINDS/wiki]].
	53	+We promote sharing of experimental data, models, software, web services, metadata models,
51	51
52		-Data and models are linked to and discoverable via the species-specific [[EBRAINS siibra atlas viewer>>url:https://ebrains.eu/services/atlases/brain-atlases]] by using interoperable metadata schemas as defined in [[SANDS>>url:https://github.com/HumanBrainProject/SANDS/wiki]].
53	53
54		-
55	55	----
56	56
57	57	=== Step by step - Experimental data ===
...	...	@@ -161,20 +161,12 @@
161	161
162	162	----
163	163
164		-=== Webservices and metadata models ===
	165	+=== When you've completed the curation process ===
165	165
166		-=== (% style="color:#e74c3c; font-size:16px" %)Contact....(% style="color:#4a5568; font-size:16px" %) (%%) ===
	167	+Curated data, models and software are made available in the [[the EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]]. This makes the data and metadata discoverable in the [[Knowledge Graph Search>>url:https://search.kg.ebrains.eu/]] and programmatically via the [[Knowledge Graph API>>url:https://docs.kg.ebrains.eu/8387ccd27a186dea3dd0b949dc528842/api_endpoints.html]]. The data, models and software are integrated in the EBRAINS Knowledge Graph by interoperable metadata schemas as defined in [[openMINDS>>url:https://github.com/HumanBrainProject/openMINDS/wiki]].
167	167
168		-----
	169	+Data and models are linked to and discoverable via the species-specific [[EBRAINS Interactive Atlas Viewer>>url:https://ebrains.eu/services/atlases/brain-atlases]] by using interoperable metadata schemas as defined in [[SANDS>>url:https://github.com/HumanBrainProject/SANDS/wiki]].
169	169
170		-=== **The curation team: meet the curators** ===
171		-
172		-[[image:fb6d6429-709e-4f4d-be3b-eab0a46695bd.JPG||height="184" width="137"]]
173		-
174		-**Sophia Pieschnik**
175		-(% class="small" %)Biology (B.Sc.)
176		-Neurocognitive Psychology (M.Sc.)
177		-
178	178	----
179	179
180	180	== **Information and resources for researchers looking to share data** ==
...	...	@@ -183,14 +183,6 @@
183	183
184	184	----
185	185
186		-=== **Enrich your dataset, model or software** ===
187		-
188		-(% style="color:#e74c3c" %)- Workflows [information]
189		-
190		-(% style="color:#e74c3c" %)- Learning resource [information]
191		-
192		-----
193		-
194	194	=== **The benefits of sharing data ** ===
195	195
196	196	(% style="color:#000000" %)Sharing your data, models or code (research products) via EBRAINS makes it discoverable amongst other research products available in the (%%)[[(% style="color:#000000" %)EBRAINS Knowledge Graph>>https://kg.ebrains.eu/]](%%). This is made possible by the highly flexible metadata framework describing neuroscience data in detail.
...	...	@@ -209,6 +209,14 @@
209	209
210	210	----
211	211
	197	+(% style="font-family:inherit" %) (% style="color:#1a202c; font-family:inherit; font-size:26px" %)**What can I share on EBRAINS? **
	198	+
	199	+(% class="wikigeneratedid" id="H" %)
	200	+[[image:image-20230324170829-2.png]]
	201	+
	202	+
	203	+----
	204	+
212	212	=== **At a glance: "Sharing experimental data on EBRAINS" ** ===
213	213
214	214
...	...	@@ -221,14 +221,11 @@
221	221
222	222	----
223	223
224		-=== **Integrate your data on EBRAINS with other services** ===
	217	+=== **Integrate your data in the EBRAINS atlas services** ===
225	225
226		-EBRAINS supports further integration for a variety of data, and is continuously looking to increase the number of interoperable services.
	219	+EBRAINS supports viewers for a variety of data, and is continuously looking to improve the services for visualising data. For 2D histology image data that is registered to an EBRAINS supported brain atlas, the data and the overlying atlas plates can be uploaded to the LocaliZoom viewer. See for example the [[LocaliZoom links available for this dataset>>https://doi.org/10.25493/T686-7BX]] as an example.
227	227
228		-* Integrate image data with //the Mio viewer//: (% style="color:#e74c3c" %)[description]
229		-* Integrate atlas-registered 2D image data with //the Localizoom viewer//: (% style="color:#e74c3c" %)[description](%%). See the [[LocaliZoom links available for this dataset>>https://doi.org/10.25493/T686-7BX]] as an example.
230		-* Add your data, models or software to a// Live paper//: (% style="color:#e74c3c" %)[description]
231		-* Integrate your data to //the atlas viewer Siibra//: (% style="color:#e74c3c" %)[description](%%). To learn more about how to integrate your data to atlases, check out the [[Atlas services>>https://ebrains.eu/services/atlases#Integratedatatoanatlas]] on ebrains.eu.
	221	+To learn more about how to integrate your data to atlases, check out the [[Atlas services>>https://ebrains.eu/services/atlases#Integratedatatoanatlas]] on ebrains.eu.
232	232
233	233	----
234	234