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Changes for page Data Curation

Last modified by abonard on 2025/06/03 10:55
From version 165.1
edited by jan
on 2023/06/06 11:27
Change comment: There is no comment for this version
To version 168.1
edited by eapapp
on 2023/06/06 13:58
Change comment: There is no comment for this version

Summary

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1 -XWiki.jan
1 +XWiki.eapapp
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1 1  == Publishing neuroscience data, models and software via EBRAINS ==
2 2  
3 3  
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8 8  {{toc depth="3" start="2"/}}
9 9  {{/box}}
10 10  
11 -
12 12  == **Information to get started** ==
13 13  
14 14  **[[REQUEST CURATION>>https://nettskjema.no/a/277393#/]] to share data, simulations, computational models, and software, - or to add a new version of an existing one. **
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55 55  
56 56  [[image:image-20230326054341-1.png]]
57 57  
58 -==== [[[[image:image-20230324171114-2.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]//All you need to know to share data on EBRAINS.// ====
76 +(% class="box floatinginfobox" id="share-data-infographic" %)
77 +(((
78 +(% style="text-align:center" %)
79 +//Download our infographic//
80 +//with all you need to know//
81 +//to share data on EBRAINS: //
82 +// //
83 +[[[[image:image-20230324171114-2.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/dfd374b9b43a458192e9/]]
59 59  
85 +
86 +)))
60 60  
88 +
61 61  ==== **1. Provide some general information about your dataset** ====
62 62  
63 63  
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120 120  
121 121  Journal publications sufficiently describing the shared data, such as made available through [[Nature Scientific Data>>http://www.nature.com/sdata/about]], [[Elsevier Data in Brief>>http://www.journals.elsevier.com/data-in-brief/]], [[BMC Data note>>https://bmcresnotes.biomedcentral.com/submission-guidelines/preparing-your-manuscript/data-note]] and more, can replace the EBRAINS Data Descriptor.
122 122  
123 -==== [[[[image:image-20230324171109-1.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]//The EBRAINS Data descriptor at-a-glance// ====
151 +(% class="box floatinginfobox" id="data-descriptor-infographic" %)
152 +(((
153 +(% style="text-align:center" %)
154 +//Download our infographic: //
155 +//The EBRAINS Data//
156 +//Descriptor at a glance//
157 +// //
158 +[[[[image:image-20230324171109-1.png||height="150" width="106"]]>>https://drive.ebrains.eu/f/c1ccb78be52e4bdba7cf/]]
159 +
160 +)))
124 124  
125 -
126 126  ==== **5. Preview and publish ** ====
127 127  
128 128  
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136 136  (% class="box floatinginfobox" %)
137 137  (((
138 138  **Human subject data that can be shared on EBRAINS:**
175 +// //
176 +// - Post-mortem data//
177 +// - Aggregated data//
178 +// - Strongly pseudonymized or de-identified subject data//
179 +// with a legal basis for sharing (e.g. Informed Consent)//
180 +// //
139 139  
140 -- Post-mortem data
141 -- Aggregated data
142 -- Strongly pseudonymized or de-identified subject data with a legal basis for sharing (e.g. Informed Consent)
143 -
144 -(% class="small" %)//If you have human data that does not classify as any of the above, please get in touch and we will clarify the available options. //
182 +(% class="small" %)
183 +//If you have human data that does not qualify as any of the above,//
184 +//please [[get in touch>>https://www.ebrains.eu/contact/]] and we will clarify the available options.//
145 145  )))
146 146  
147 147  Human subject data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we need to assess this is collected via our [[Ethics and Regulatory Compliance Survey>>https://nettskjema.no/a/224765]].
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182 182  For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic below.
183 183  
184 184  (% style="text-align: right;" %)
185 -==== //Software curation at a glance //[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] ====
225 +==== //Software curation at a glance          //[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] ====
186 186  
187 187  ----
188 188  
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214 214  
215 215  (% class="small" %)Curation Scientist
216 216  Neuroscience (PhD)(%%)
217 -(% class="small" style="color:#4a5568" %)**Behavioral neuroscience and microscopy**
257 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Behavioral neuroscience and microscopy**
218 218  )))|(% style="width:303px" %)(((
219 219  [[image:Camilla.jpg||alt="My project.jpg" height="209" width="167"]]
220 220  
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223 223  (% class="small" %)Curation Scientist,
224 224  Phd Student
225 225  Neuroscience (M. Sc.)(%%)
226 -(% class="small" style="color:#4a5568" %)**Neuroanatomy and data integration**
266 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and data integration**
227 227  )))|(% style="width:303px" %)(((
228 228  [[image:My project (1).jpg||height="209" width="167"]]
229 229  
... ... @@ -232,7 +232,7 @@
232 232  (% class="small" %)Curation Scientist,
233 233  Phd Student
234 234  Neuroscience (M. Sc.)(%%)
235 -(% class="small" style="color:#4a5568" %)**Neuroanatomy and structural connectivity**
275 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and structural connectivity**
236 236  )))|(% style="width:303px" %)(((
237 237  [[image:My project1.jpg||height="209" width="167"]]
238 238  
... ... @@ -240,7 +240,7 @@
240 240  
241 241  (% class="small" %)Curation Scientist
242 242  Neurocognitive Psychology (M. Sc.)(%%)
243 -(% class="small" style="color:#4a5568" %)**Neuroimaging **
283 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroimaging **
244 244  )))
245 245  
246 246  |(% style="width:303px" %)(((
... ... @@ -251,7 +251,7 @@
251 251  (% class="small" %)Curation Scientist,
252 252  Phd Student
253 253  Neuroscience (M. Sc.)(%%)
254 -(% class="small" style="color:#4a5568" %)**Neuroanatomy and brain atlases**
294 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Neuroanatomy and brain atlases**
255 255  )))| | |
256 256  
257 257  
... ... @@ -265,7 +265,7 @@
265 265  (% class="small" %)Curation Scientist,
266 266  Phd Student
267 267  Sensors and Cognitive Psychology (M. Sc.)(%%)
268 -(% class="small" style="color:#4a5568" %)**Human-Computer Interaction**
308 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Human-Computer Interaction**
269 269  )))|(% style="width:303px" %)(((
270 270  
271 271  
... ... @@ -283,7 +283,7 @@
283 283  
284 284  (% class="small" %)Knowledge Systems Engineer
285 285  Dr. rer. nat. (Systems Neuroscience)(%%)
286 -(% class="small" style="color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
326 +(% class="small" style="--darkreader-inline-color:#d3cbbf; color:#4a5568" %)**Standard development, data & knowledge management, interdisciplinary communication, data analysis**
287 287  )))|(% style="width:303px" %) |
288 288  
289 289  ----
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318 318  ==== **Add a tutorial or learning resource ** ====
319 319  
320 320  (% class="wikigeneratedid" id="H-LearningresourceA05Binformation5D" %)
321 -(% style="color:#000000" %)//More information will follow//
361 +(% style="--darkreader-inline-color:#ffffff; color:#000000" %)//More information will follow//
322 322  
323 323  
324 324  ==== **Create a workflow** ====
325 325  
326 326  (% class="wikigeneratedid" id="H-Workflows5Binformation5D" %)
327 -(% style="color:#000000" %)//More information will follow//
367 +(% style="--darkreader-inline-color:#ffffff; color:#000000" %)//More information will follow//
328 328  
329 329  ----
330 330  
... ... @@ -343,7 +343,7 @@
343 343  === **Frequently asked questions ** ===
344 344  
345 345  (((
346 -==== ====
386 +==== ====
347 347  
348 348  (((
349 349  >The curation process is time consuming and difficult
Public

Data Curation