Attention: Jupyter services at the JSC site *are currently running normally*, but the underlying infrastructure remains fragile. If you encounter issues when using the JSC, we recommend selecting the Cineca execution site as an alternative


Changes for page Data Curation

Last modified by abonard on 2025/06/03 10:55

From version 194.2
edited by adavison
on 2023/06/14 14:59
Change comment: There is no comment for this version
To version 192.1
edited by eapapp
on 2023/06/13 10:26
Change comment: There is no comment for this version

Summary

Details

Page properties
Author
... ... @@ -1,1 +1,1 @@
1 -XWiki.adavison
1 +XWiki.eapapp
Content
... ... @@ -211,30 +211,6 @@
211 211  === Step by Step - Models ===
212 212  
213 213  
214 -
215 -
216 -==== 1. Start early ====
217 -
218 -It is not necessary to wait until you are ready to publish to register your model with EBRAINS.
219 -
220 -By registering a model early in your project, you can take advantage of EBRAINS tools
221 -to keep track of simulations and to share them with your collaborators.
222 -
223 -==== 2. Create/choose a Collab workspace ====
224 -
225 -We use EBRAINS Collaboratory "collab" workspaces to help manage the model curation process.
226 -
227 -In particular, we use collab membership (the "Team") to control who can view or edit your model metadata prior to publication.
228 -
229 -It is up to you whether you create a new collab for each model, or reuse an existing collab
230 -(it is no problem to have multiple models associated with a single collab).
231 -
232 -Collabs are also useful for storing simulation results, adding documentation for your model,
233 -and/or providing tutorials in Jupyter notebooks.
234 -
235 -
236 -
237 -
238 238  ~1. Request curation using the [[Curation request form>>https://nettskjema.no/a/277393#/]]. You will be contacted by a curator with more information.
239 239  
240 240  
... ... @@ -268,11 +268,6 @@
268 268  
269 269  == **The openMINDS metadata framework** ==
270 270  
271 -(% class="box floatinginfobox" %)
272 -(((
273 -[[[[image:https://github.com/HumanBrainProject/openMINDS/raw/main/img/light_openMINDS-logo.png||alt="openMINDS logo" height="87" width="164"]]>>https://github.com/HumanBrainProject/openMINDS]]
274 -)))
275 -
276 276  openMINDS (open Metadata Initiative for Neuroscience Data Structures) is a community-driven, open-source metadata framework for graph database systems, such as the EBRAINS Knowledge Graph. It is composed of linked metadata models, libraries of serviceable metadata instances, and supportive tooling ([[openMINDS Python>>url:https://pypi.org/project/openMINDS/]], openMINDS Matlab). For exploring the openMINDS schemas, go to the [[HTML documentation>>url:https://humanbrainproject.github.io/openMINDS/]]. For a full overview of the framework, go to [[the openMINDS collab>>url:https://wiki.ebrains.eu/bin/view/Collabs/openminds/]] or the [[GitHub repository>>https://github.com/HumanBrainProject/openMINDS]].
277 277  
278 278  For feedback, requests, or contributions, please get in touch with the openMINDS development team via
... ... @@ -389,6 +389,7 @@
389 389  |(% colspan="2" %)**Use your research product in an interactive publication**
390 390  |[[image:LivePaper_screenshot.PNG]]|Add your data, models or software to a// Live paper. //Read more about [[Live papers on ebrains.eu>>https://www.ebrains.eu/data/live-papers/live-papers]].
391 391  
363 +
392 392  ----
393 393  
394 394  ==== **Add a tutorial or learning resource ** ====
Public

Data Curation