Changes for page Data Curation
Last modified by abonard on 2025/06/03 10:55
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... ... @@ -210,7 +210,7 @@ 210 210 211 211 Alternatively, you can upload code to the Collab Drive or Bucket storage. 212 212 213 -==== 4.Submit metadata ==== 213 +==== 4. Submit metadata ==== 214 214 215 215 We recommend submitting metadata using the Model Catalog app, installed in your collab. 216 216 ... ... @@ -227,7 +227,7 @@ 227 227 As development of your model proceeds, you can easily register new versions of the code, 228 228 and new parameterizations, by clicking "Add new version". 229 229 230 -If you prefer not to use the app, you can instead fill in the [[Curation requestform>>https://nettskjema.no/a/277393#/]].,230 +If you prefer not to use the app, you can instead fill in the [[EBRAINS Curation Request Form>>https://nettskjema.no/a/386195]]., 231 231 and you will be contacted by e-mail with further instructions. 232 232 233 233 ==== 5. Provide a reference dataset ==== ... ... @@ -271,26 +271,15 @@ 271 271 272 272 === Step by Step - Software === 273 273 274 +We ask software developers to provide their metadata in the "CodeMeta" format. [[CodeMeta>>https://codemeta.github.io/]] is a common format for software metadata, supported by GitHub, Zenodo, FigShare, DataCite, and the US National Science Foundation. 274 274 275 -(% class="box floatinginfobox" id="software-curation-infographic" %) 276 -((( 277 -(% style="text-align:center" %) 278 -//Software curation at a glance// 279 -// // 280 -[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]] 281 -))) 276 +1. Create a codemeta.json file for your software. There are several [[tools>>https://codemeta.github.io/tools/]] to help you do this, for example the [[CodeMeta generator>>https://codemeta.github.io/codemeta-generator]] app. Please fill in as many of the fields as possible. 277 +1. Place this file in the root folder of your code repository. 278 +1. Contact [[EBRAINS support>>https://www.ebrains.eu/contact/]] to request curation of your software, letting us know the URL of your code repository. If you need help hosting your code online, please also let us know. 279 +1. After a quality check, we integrate and publish the information contained in your codemeta.json file to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community. 282 282 283 - (%style="margin-left:15px"%)[[[[image:Screenshot2023-06-06 1122082.png||alt="swc-flow.png"height="136"width="637"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopenernoreferrer"target="_blank"]]281 +When you release a new version of your software, just update the codemeta.json file in your repository. We will check the repository on a regular basis, and if the version identifier has changed the Knowledge Graph will be updated accordingly. 284 284 285 -1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions, you will find the links to your software and software version entries in the Knowledge Graph. 286 -1. Enter the metadata of your software in your private space of the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided by the curator. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary. 287 -1. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community. 288 - 289 -If you want to add a new version to an already curated software, please request this via the [[curation request form>>https://nettskjema.no/a/277393]]. 290 - 291 -For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic on the right. 292 - 293 - 294 294 ---- 295 295 296 296 === Sharing human subject data === ... ... @@ -521,6 +521,8 @@ 521 521 522 522 //Institute of Neuroscience and Medicine (INM-1), Research Centre Jülich, Germany (PI: Timo Dicksheid)// 523 523 513 +//Paris-Saclay Institute of Neuroscience, CNRS, Université Paris-Saclay, France (PI: Andrew P. Davison)// 514 + 524 524 ---- 525 525 526 526 == References ==