Changes for page Data Curation

Last modified by abonard on 2025/06/03 10:55
From version 222.1
edited by adavison
on 2024/07/05 18:47
Change comment: There is no comment for this version
To version 220.1
edited by eapapp
on 2024/06/20 12:31
Change comment: There is no comment for this version

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1 -XWiki.adavison
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210 210  
211 211  Alternatively, you can upload code to the Collab Drive or Bucket storage.
212 212  
213 -==== 4. Submit metadata ====
213 +==== 4.Submit metadata ====
214 214  
215 215  We recommend submitting metadata using the Model Catalog app, installed in your collab.
216 216  
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227 227  As development of your model proceeds, you can easily register new versions of the code,
228 228  and new parameterizations, by clicking "Add new version".
229 229  
230 -If you prefer not to use the app, you can instead fill in the [[EBRAINS Curation Request Form>>https://nettskjema.no/a/386195]].,
230 +If you prefer not to use the app, you can instead fill in the [[Curation request form>>https://nettskjema.no/a/277393#/]].,
231 231  and you will be contacted by e-mail with further instructions.
232 232  
233 233  ==== 5. Provide a reference dataset ====
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271 271  
272 272  === Step by Step - Software ===
273 273  
274 -We ask software developers to provide their metadata in the "CodeMeta" format. [[CodeMeta>>https://codemeta.github.io/]] is a common format for software metadata, supported by GitHub, Zenodo, FigShare, DataCite, and the US National Science Foundation.
275 275  
276 -1. Create a codemeta.json file for your software. There are several [[tools>>https://codemeta.github.io/tools/]] to help you do this, for example the [[CodeMeta generator>>https://codemeta.github.io/codemeta-generator]] app. Please fill in as many of the fields as possible.
277 -1. Place this file in the root folder of your code repository.
278 -1. Contact [[EBRAINS support>>https://www.ebrains.eu/contact/]] to request curation of your software, letting us know the URL of your code repository. If you need help hosting your code online, please also let us know.
279 -1. After a quality check, we integrate and publish the information contained in your codemeta.json file to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.
275 +(% class="box floatinginfobox" id="software-curation-infographic" %)
276 +(((
277 +(% style="text-align:center" %)
278 +//Software curation at a glance//
279 +// //
280 +[[[[image:Thumb2.png||alt="EBRAINS-Share-Software.pdf" height="287" width="197"]]>>attach:EBRAINS-Share-Software-4.pdf]]
281 +)))
280 280  
281 -When you release a new version of your software, just update the codemeta.json file in your repository. We will check the repository on a regular basis, and if the version identifier has changed the Knowledge Graph will be updated accordingly.
283 +(% style="margin-left:15px" %)[[[[image:Screenshot 2023-06-06 1122082.png||alt="swc-flow.png" height="136" width="637"]]>>https://www.ebrains.eu/tools/ebrains-curation-request-form||rel="noopener noreferrer" target="_blank"]]
282 282  
285 +1. Fill in the [[request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. You'll be contacted by a curator with further instructions. In these instructions, you will find the links to your software and software version entries in the Knowledge Graph.
286 +1. Enter the metadata of your software in your private space of the [[Knowledge Graph Editor>>url:https://editor.kg.ebrains.eu/]] by using the links provided by the curator. Please provide the metadata for your software as complete as possible. This makes it easier for users to find and use your software. If you have questions feel free to contact the curation support. After you have finished editing your entries, please let the curators know by replying to your ticket. We curate your metadata and get back to you, if necessary.
287 +1. After a quality check, we integrate and publish the information to the Knowledge Graph. Your software is then searchable and usable for the neuroscience community.
288 +
289 +If you want to add a new version to an already curated software, please request this via the [[curation request form>>https://nettskjema.no/a/277393]].
290 +
291 +For more information, visit our [[Guide to Software Curation in the EBRAINS Knowledge Graph>>url:https://wiki.ebrains.eu/bin/view/Collabs/swc-guide]] or see our infographic on the right.
292 +
293 +
283 283  ----
284 284  
285 285  === Sharing human subject data ===
Public

Data Curation