Changes for page Data Curation
Last modified by spieschnik on 2025/11/17 10:45
From version 228.1
edited by puchades
on 2025/05/07 15:03
on 2025/05/07 15:03
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To version 231.1
edited by spieschnik
on 2025/11/17 10:42
on 2025/11/17 10:42
Change comment:
There is no comment for this version
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... ... @@ -207,7 +207,7 @@ 207 207 We recommend storing model code and/or configuration files in an online Git repository, for example on GitHub. 208 208 This repository should be public when you publish the model, but a private repository can be used for model development. 209 209 210 -Alternatively, you can upload code to the Collab Drive or Bucket storage. 210 +Alternatively, you can upload code to the Collab Drive (in this case, curators will copy it to a read-only Bucket upon publication) or Bucket storage. 211 211 212 212 ==== 4. Submit metadata ==== 213 213 ... ... @@ -260,7 +260,7 @@ 260 260 261 261 The curators will also take a snapshot of your model code. 262 262 263 -* For models in public Git repositories, we archive a copy of the repository in [[Software Heritage>>https://www.softwareheritage.org/||rel="noopener noreferrer" target="_blank"]]. 263 +* For models in public Git repositories, we archive a copy of the repository in [[Software Heritage>>https://www.softwareheritage.org/||rel="noopener noreferrer" target="_blank"]] (via the updateSWH extension). 264 264 * For models in a collab Bucket or Drive, we make a read-only copy of the code in a public container in the EBRAINS repository. 265 265 266 266 Once this is done, you will be invited to review a preview of how the model entry will appear in the KG Search, ... ... @@ -287,11 +287,11 @@ 287 287 ((( 288 288 **Human subject data that can be shared on EBRAINS:** 289 289 // // 290 + 291 +// - Anonymized data// 290 290 // - Post-mortem data// 291 -// - Aggregated data// 292 -// - Strongly pseudonymized or de-identified subject data// 293 -// with a legal basis for sharing (e.g. Informed Consent)// 294 -// // 293 +// - Aggregated data // 294 + 295 295 296 296 (% class="small" %) 297 297 //If you have human data that does not qualify as any of the above,// ... ... @@ -299,16 +299,12 @@ 299 299 ))) 300 300 301 301 302 -Human subject data shared on EBRAINS must comply with [[GDPR >>https://gdpr-info.eu/]]and [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The information we needto assess this is collected via our [[EthicsandRegulatoryCompliance Survey>>https://nettskjema.no/a/224765]].302 +Human subject data shared on EBRAINS must comply with the [[GDPR >>https://gdpr-info.eu/]]and relevant [[EU directives>>https://eur-lex.europa.eu/legal-content/EN/TXT/?uri=celex%3A32010L0063]]. The necessary information to assess this compliance is collected via our [[curation request form>>https://www.ebrains.eu/tools/ebrains-curation-request-form]]. 303 303 304 - Post-mortem and aggregatedhumandata can be shared openly,given direct identifiersin the metadata are removed.Stronglypseudonymizedandde-identifieddatacan be sharedviatheHumanDataGateway(HDG).304 +Anonymous data, including post-mortem and aggregated data, can be shared openly on the condition that subject identifiers are removed from the metadata. Such identifiers must not be shared with the curation team when submitting metadata for curation. 305 305 306 - TheHumanDataGateway(HDG) wasintroducedinFebruary2021as aresponseto theneedsofmultiple dataproviders whoarebringinghumansubjectdatato EBRAINS.HDGcovers thesharingof strongly pseudonymizedorde-identified data, a limitedrangehumansubjectdatawithoutdirectidentifiers and withveryfewindirectidentifiers.306 +Identifiable or sensitive data are shared under restricted access and cannot be stored on the EBRAINS data storage. While the dataset as a whole is discoverable through anonymous metadata published on EBRAINS, access to the actual data files is managed via [[EBRAINS Trusted Research Environments>>https://wiki.ebrains.eu/bin/view/Collabs/trusted-research-environments]]. The data custodian is required to comply with the[[ EBRAINS special terms for restricted access datasets>>https://drive.ebrains.eu/f/5a9bb3bd048446ae8ef6/?dl=1]]. 307 307 308 -The HDG adds an an authentication layer on top of the data. This means that **data users **must request access to the data (via their EBRAINS account) and will receive access provided they actively accept the [[EBRAINS Access Policy>>https://ebrains.eu/terms#access-policy]], the [[EBRAINS General Terms of Use>>https://ebrains.eu/terms#general-terms-of-use]], and the [[EBRAINS Data Use Agreement>>https://ebrains.eu/terms#data-use-agreement]]. The account holder also have to accept that information about their request and access to specific data under HDG is being tracked and stored. **Data owners** must be aware that sharing under the HDG affects the legal responsibilities for the data. They must agree to joint control of the data (see the [[Data Provision Protocol v1>>url:https://strapi-prod.sos-ch-dk-2.exo.io/EBRAINS_Data_Provision_Protocol_dfe0dcb104.pdf]], section 1.4 - 1.5) and the Data Protection Officers of the responsible institutions must have accepted that the data can be shared under HDG. 309 - 310 -The HDG is an extension of the existing services and does not replace the future EBRAINS Service for sensitive data (planned for 2024) which is outside the domain of the current EBRAINS Data and Knowledge services. 311 - 312 312 ---- 313 313 314 314 == **The openMINDS metadata framework** ==