Attention: The Collaboratory IAM will down for up to 1 hour on Monday, the 7th of July 2025 starting from 5pm CEST (my timezone) for up to 1 hour. Any and all services, which require a user login with an EBRAINS account, will be un-available during that time


Wiki source code of Distance-Fluctuations

Version 7.1 by emacasali on 2022/09/14 21:47

Show last authors
1 (% class="jumbotron" %)
2 (((
3 (% class="container" %)
4 (((
5 = Distance Fluctuation (DF) Analysis =
6
7 Giorgio Colombo Group (UNIPV)
8 )))
9 )))
10
11 (% class="row" %)
12 (((
13 (% class="col-xs-12 col-sm-8" %)
14 (((
15 = What DF matrices are? =
16
17 The analysis of the results of a MD simulation can performed using the Distance Fluctuation matrices (DF), based on the Coordination Propensity hypothesis:
18
19 (% style="text-align:center" %)
20 [[image:CodeCogsEqn-58.png||height="34" width="181"]]
21
22 low CP values, corresponding to low pair-distance fluctuations, highlight groups of residues that move in a mechanically coordinated way.
23
24
25 == Who has access? ==
26
27 Describe the audience of this collab.
28
29
30 = Who has access? =
31
32 Describe the audience of this collab.
33 )))
34
35
36 (% class="col-xs-12 col-sm-4" %)
37 (((
38 {{box title="**Contents**"}}
39 {{toc/}}
40
41
42 {{/box}}
43
44
45 )))
46 )))