Changes for page Tools and services documentation
Last modified by graber on 2023/09/28 09:25
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... ... @@ -16,6 +16,9 @@ 16 16 QuickNII is a tool for user guided affine registration (anchoring) of 2D experimental image data, typically high resolution microscopic images, to 3D atlas reference space, facilitating data integration through standardized coordinate systems.| 17 17 |**[[VoluBA>>url:https://voluba-user-doc.apps-dev.hbp.eu/]]** 18 18 volumetric brain anchoring 19 +=== Collaboratory === 20 +|**[[Collaboratory>>url:https://wiki.ebrains.eu/bin/view/Collabs/the-collaboratory/]]** 21 +Workspaces in the Cloud for your research, development, documentation, and collaboration. 19 19 === Data analysis === 20 20 |**[[Elephant>>url:https://elephant.readthedocs.io/en/v0.6.4/index.html]]** 21 21 Elephant is an open-source Python library for the analysis of neurophysiology data, using Neo data structures.|**[[Elephant>>url:https://elephant.readthedocs.io/en/latest/index.html]]** ... ... @@ -30,16 +30,29 @@ 30 30 |**[[EBRAINS Knowledge Graph>>url:https://kg.ebrains.eu/]]** 31 31 A user-driven, data-sharing and data-management infrastructure accelerating scientific progress by providing access to large collections of curated, heterogeneous neuroscience data. 32 32 === High-performance computing === 33 -|**[[SLURM plugin for the co-allocation of compute and data resources>>url:https://github.com/HumanBrainProject/coallocation-slurm-plugin/blob/master/README.md]]** 36 +|**[[Fenix>>url:https://fenix-ri.eu/about-fenix/documentation]]** 37 +Delivering e-infrastructure services federated as the Fenix Infrastructure.|**[[SLURM plugin for the co-allocation of compute and data resources>>url:https://github.com/HumanBrainProject/coallocation-slurm-plugin/blob/master/README.md]]** 34 34 A plugin for SLURM used for the co-allocation of compute and data resources.|**[[Unicore>>url:https://www.unicore.eu/documentation/]]** 35 -A set of software components for federated access to high-performance compute and data resources. 39 +A set of software components for federated access to high-performance compute and data resources.| 40 + 41 +=== Link === 42 + 36 36 === Medical data analytics === 37 37 |**[[Bids Manager & Pipeline>>url:https://github.com/Dynamap/BIDS_Manager]]** 38 38 Bids Manager is a tool that allows various users to easily import and explore databases in BIDS format. Bids Pipeline, an extension of Bids Manager, allows to launch process on BIDS database.|**[[HiBoP>>url:https://collab.humanbrainproject.eu/#/collab/78584/nav/531987?state=uuid%3Df72e40d9-a0bf-4ab7-8a27-462911107c5f]]** 39 39 3D visualization software for intracranial EEG. 40 40 === Neuromorphic computing === 41 -|**[[Neuromorphic Platform Python client>>url:https://electronicvisions.github.io/hbp-sp9-guidebook/]]** 42 -Client software for the Human Brain Project Neuromorphic Computing Platform. 48 +|**[[BrainScaleS>>url:https://flagship.kip.uni-heidelberg.de/jss/FileExchange/D9.7.1_Neuromorphic_Platform_Specification_-_public_version.pdf?fID=1887&s=qqdXDg6HuX3&uID=65]]** 49 +Neural network emulation in 1000x accelerated biological real-time.|**[[Neuromorphic Platform Python client>>url:https://electronicvisions.github.io/hbp-sp9-guidebook/]]** 50 +Client software for the Human Brain Project Neuromorphic Computing Platform.|**[[SpiNNaker Jupyter Service>>url:http://spinnakermanchester.github.io/common_pages/5.0.0/How_to_use_Jupyter_notebooks_on_SpiNNaker.pdf]]** 51 +Jupyter notebook service running next to the SpiNNaker 1Million machine in Manchester.| 52 +|**[[SpiNNaker Local Boards>>url:https://spinnakermanchester.github.io/]]** 53 +Physical SpiNNaker boards that are loaned to or owned by individuals or groups, but not connected to the SpiNNaker 1Million machine in Manchester.|**[[SpiNNaker Machine>>url:https://spinnakermanchester.github.io/]]** 54 +The SpiNNaker 1Million core machine in Manchester consisting of 1200 SpiNNaker boards.|**[[SpiNNaker Remote Access>>url:https://flagship.kip.uni-heidelberg.de/jss/FileExchange/D9.7.1_Neuromorphic_Platform_Specification_-_public_version.pdf?fID=1887&s=qqdXDg6HuX3&uID=65]]** 55 +The SpiNNaker batch execution service allowing Neuromorphic Computing Platform jobs to be run on the SpiNNaker 1Million machine in Manchester.| 56 +|**[[SpiNNaker Software>>url:http://spinnakermanchester.github.io/]]** 57 +The Software used to compile and execute Neural Networks described in PyNN on SpiNNaker hardware.|**[[SpiNNaker-NRP integration>>url:http://spinnakermanchester.github.io/common_pages/5.0.0/How_to_use_Jupyter_notebooks_on_SpiNNaker.pdf]]** 58 +Allows the NRP to use SpiNNaker as a brain for robotic simulations. 43 43 === Neurorobotics === 44 44 |**[[Neurorobotics Platform>>url:https://www.neurorobotics.net/Documentation/nrp/user_manual/index.html]]** 45 45 The NRP supports closed-loop neuroscience and embodied AI by connecting brains and bodies in simulation.