Last modified by graber on 2023/09/28 09:25

From version 54.2
edited by graber
on 2023/05/26 10:06
Change comment: There is no comment for this version
To version 56.1
edited by graber
on 2023/05/26 10:10
Change comment: There is no comment for this version

Summary

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36 36  Elephant is an open-source Python library for the analysis of neurophysiology data, using Neo data structures.|**[[HBP Validation Framework - Python Client>>url:http://hbp-validation-client.readthedocs.io/]]**
37 37  A Python package for working with the Human Brain Project Model Validation Framework.|**[[Neo>>url:https://neo.readthedocs.io/en/stable/]]**
38 38  an object model for handling electrophysiology data in multiple formats.|
39 +
39 39  |**[[Neo Viewer>>url:https://neo-viewer.brainsimulation.eu/]]**
40 40  Django/Angular software for graphing neural activity data (analog signals, spike trains etc.) read from Neo files.|**[[NeuroScheme>>url:https://neuroscheme-documentation.readthedocs.io/en/latest/]]**
41 41  NeuroScheme is a tool for navigating, exploring, creating and interacting with NeuroScience data using abstract, schematic or expressive representations.|**[[NeuroTessMesh>>url:https://neurotessmesh-documentation.readthedocs.io/en/latest/]]**
42 42  A Tool for the Generation and Visualization of Neuron Meshes and Adaptive On-the-Fly Refinement|
44 +
43 43  |**[[Nutil>>url:https://wiki.ebrains.eu/bin/view/Collabs/quint]]**
44 44  Nutil aims to both simplify and streamline the mechanism of pre-and-post processing 2D brain image data from mouse and rat.|**[[ViSimpl>>url:https://visimpl-documentation.readthedocs.io/en/latest/]]**
45 45  ViSimpl integrates a set of visualization and interaction tools that provide a multi-view visual analysis of brain simultation data.|**[[ilastik>>url:http://ilastik.org/documentation/index.html]]**
46 46  ilastik is a simple, user-friendly tool for interactive image classification, segmentation and analysis.|
49 +
47 47  |**[[Brain-cockpit>>url:https://alexisthual.github.io/brain-cockpit/]]**
48 48  Web-based application to explore large fMRI datasets and inter-subject alignments.|**[[Cobrawap>>url:https://cobrawap.readthedocs.io/]]**
49 -Cobrawap is a Python-based, adaptable, and reusable pipeline for analyzing cortical wave activity.
52 +Cobrawap is a Python-based, adaptable, and reusable pipeline for analyzing cortical wave activity.|**[[Viziphant>>url:https://viziphant.readthedocs.io/en/latest/index.html]]**
53 +Viziphant provides an easy way to generate plots and interactive visualizations of neuroscientific data and analysis results|
50 50  
51 51  === Simulation ===
52 52  
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82 82  
83 83  |**[[Snudda>>url:https://github.com/Hjorthmedh/Snudda/wiki]]**
84 84  Snudda is a tool that allows the user to place neurons within multiple volumes, then performs touch detection to infer where putative synapses are based on reconstructed neuron morphologies.|**[[BlueNaaS-Subcellular>>url:https://subcellular-bsp-epfl.apps.hbp.eu/static/docs.html]]**
85 -BlueNaaS-Subcellular is designed as a web based environment for the creation and simulation of reaction-diffusion models.|**[[BlueNaaS-Subcellular>>url:https://subcellular-bsp-epfl.apps.hbp.eu/static/docs.html]]**
86 -BlueNaaS-Subcellular is designed as a web based environment for the creation and simulation of reaction-diffusion models|
89 +BlueNaaS-Subcellular is designed as a web based environment for the creation and simulation of reaction-diffusion models.|
87 87  
88 -
89 89  === Neurorobotics ===
90 90  
91 91  |**[[Neurorobotics Platform>>url:https://www.neurorobotics.net/Documentation/nrp/user_manual/index.html]]**
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107 107  |**[[Human Intracerebral EEG Platform (HIP)>>url:https://hip-infrastructure.github.io/build/html/index.html]]**
108 108  The HIP is a state-of-the-art open-source platform, offering integrated tools and workflows for optimized collection, storage, sharing, processing and analysis of multiscale Human intracerebral EEG data.
109 109  
110 -
111 111  === Neuromorphic computing ===
112 112  
113 113  |**[[BrainScaleS>>url:https://wiki.ebrains.eu/bin/view/Collabs/neuromorphic/BrainScaleS/]]**