Changes for page Tools and services documentation
Last modified by graber on 2023/09/28 09:25
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... ... @@ -4,7 +4,7 @@ 4 4 === Collaboratory === 5 5 6 6 |(% style="width:30%" %)**[[Collaboratory>>url:https://wiki.ebrains.eu/bin/view/Collabs/the-collaboratory/]]** 7 -Workspaces in the Cloud for your research, development, documentation, and collaboration. 7 +Workspaces in the Cloud for your research, development, documentation, and collaboration. | 8 8 9 9 === Find data === 10 10 ... ... @@ -68,8 +68,11 @@ 68 68 |(% style="width:33%" %)**[[eFEL: Electrophys Feature Extraction Library>>url:https://efel.readthedocs.io/en/latest]]** 69 69 Automatically extract eFeatures from time series data recorded from neurons, both in vitro and in silico.|(% style="width:33%" %)**[[Model Validation API>>https://validation.brainsimulation.eu/docs]]** 70 70 The EBRAINS Model Validation Service is a web service to support the structured validation of neuroscience models. | (% style="width:33%" %)**[[Frites>>https://brainets.github.io/frites/overview/index.html]]**(%%) 71 -(% style="width:33%" %)Frtes is an open-source Python software to analyze neurophysiological data using information theoretical (IT) measures| 71 +(% style="width:33%" %)Frites is an open-source Python software to analyze neurophysiological data using information theoretical (IT) measures| 72 72 73 +|(% style="width:33%" %)**[[Synaptic events analyzer>>https://ebrains-cls-interactive.github.io/online-use-cases.html#/single_cell_modeling]]** 74 +Fitting synaptic events using data and model in NeuroInformatics Platform| 75 + 73 73 === Simulation === 74 74 75 75 |(% style="width:33%" %)**[[Arbor>>url:https://docs.arbor-sim.org]]** ... ... @@ -113,12 +113,14 @@ 113 113 Tools for data-driven building of subcellular biochemical signaling pathway models, including interoperable modules for model building, calibration, and model analysis.| 114 114 115 115 |(% style="width:33%" %)**[[Arbor GUI>>https://github.com/arbor-sim/gui]]** 116 -Arbor GUI is a comprehensive tool for building single cell models using Arbor. It strives to be self-contained, fast, and easy to use. | 119 +Arbor GUI is a comprehensive tool for building single cell models using Arbor. It strives to be self-contained, fast, and easy to use. |(% style="width:33%" %)**[[SSBtoolkit>>https://ssbtoolkit.readthedocs.io/en/latest/]]** 120 +The SSB computational toolkit was developed to easily predict classical pharmacodynamic models of drug-GPCR (class A) interactions given just as input structural information of the receptor and the ligand. |(% style="width:33%" %)**[[Synaptic plasticity>>https://ebrains-cls-interactive.github.io/online-use-cases.html#/single_cell_modeling]]** 121 +Configure and test different synaptic plasticity models and protocols| 117 117 118 118 === Neurorobotics === 119 119 120 120 |(% style="width:33%" %)**[[Neurorobotics Platform>>url:https://www.neurorobotics.net/Documentation/nrp/user_manual/index.html]]** 121 -The NRP supports closed-loop neuroscience and embodied AI by connecting brains and bodies in simulation. 126 +The NRP supports closed-loop neuroscience and embodied AI by connecting brains and bodies in simulation.| 122 122 123 123 === Medical data analytics === 124 124 ... ... @@ -134,7 +134,7 @@ 134 134 The MIP is an open-source platform enabling federated data analysis in a secure environment for centers interested in initiating or joining disease-oriented federations with the aim of analyzing large-scale distributed clinical datasets.| 135 135 136 136 |(% style="width:33%" %)**[[Human Intracerebral EEG Platform (HIP)>>url:https://hip-infrastructure.github.io/build/html/index.html]]** 137 -The HIP is a state-of-the-art open-source platform, offering integrated tools and workflows for optimized collection, storage, sharing, processing and analysis of multiscale Human intracerebral EEG data. 142 +The HIP is a state-of-the-art open-source platform, offering integrated tools and workflows for optimized collection, storage, sharing, processing and analysis of multiscale Human intracerebral EEG data. | 138 138 139 139 === Neuromorphic computing === 140 140 ... ... @@ -157,6 +157,11 @@ 157 157 A plugin for SLURM used for the co-allocation of compute and data resources.|(% style="width:33%" %)**[[Unicore>>url:https://www.unicore.eu/documentation/]]** 158 158 A set of software components for federated access to high-performance compute and data resources.| 159 159 165 +=== Sensitve Data === 166 + 167 +|(% style="width:33%" %)**[[Health Data Cloud>>https://xwiki.hdc.humanbrainproject.eu/bin/view/userguide/]]** 168 +EBRAINS Service for Sensitive Data provides a federated network of protected and audited secure Virtual Research Environments that enables users to demonstrate compliance with EU data protection law when processing human data such as digital human brain twins. The service is provided by Europe’s largest University Hospital, Charité Berlin. |(% style="width:33%" %) |(% style="width:33%" %) | 169 + 160 160 === Support === 161 161 162 162 Contact the [[EBRAINS High Level Support Team (HLST)>>https://ebrains.eu/support/]] if you have questions about our tools, services and workflows.