| ... |
... |
@@ -23,4 +23,10 @@ |
| 23 |
23 |
**Level**: advanced(%%) **Type**: user documentation |
| 24 |
24 |
|
| 25 |
25 |
This tutorial will show you how to build an arbor.context using a GPU. This requires that you have built Arbor with GPU support enabled. Further you will learn to build an arbor.domain_decomposition and provide an arbor.partition_hint. Finally you will profile an Arbor simulation using arbor.meter_manager. |
|
26 |
+=== [[A single cell model from the Allen Brain Atlas>>https://docs.arbor-sim.org/en/stable/tutorial/single_cell_allen.html||rel=" noopener noreferrer" target="_blank"]] === |
| 26 |
26 |
|
|
28 |
+**Level**: advanced(%%) **Type**: user documentation |
|
29 |
+ |
|
30 |
+This tutorial will teach you how to take a model from the Allen Brain Atlas, |
|
31 |
+load a morphology from an swc file and a parameter fit file and apply it to an arbor.decor. It will further show you how to build an arbor.cable_cell representative of the cell in the model and an arbor.recipe reflective of the cell stimulation in the model. Finally you will be running a simulation and visualising these results. |
|
32 |
+ |
