Changes for page Brainstorm

Last modified by abonard on 2025/04/10 15:14
From version 60.1
edited by abonard
on 2025/04/10 15:05
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To version 66.1
edited by abonard
on 2025/04/10 15:12
Change comment: There is no comment for this version

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2 2  
3 3  * ((( ==== **[[Beginner >>||anchor = "HBeginner-1"]]** ==== )))
4 4  
5 -* ((( ==== **[[Intermediate >>||anchor = "HIntermediate-1"]]** ==== )))
6 -
7 -* ((( ==== **[[Advanced >>||anchor = "HAdvanced-1"]]** ==== )))
8 -
9 9  === **Beginner** ===
10 10  
11 11  === [[Starting a new study – Explore the anatomy>>https://neuroimage.usc.edu/brainstorm/Tutorials/ExploreAnatomy||rel=" noopener noreferrer" target="_blank"]] ===
... ... @@ -32,224 +32,4 @@
32 32  **Level**: beginner(%%) **Type**: interactive tutorial
33 33  
34 34  Picking up were we left off in the previous tutorial, we will now look into how to create a new subject, how to import the anatomy, how we can best use the MRI Viewer, what are fiducial points and how can we use them, how does the validation work and how to get MNI coordinates.
35 -=== [[Introduction tutorials>>https://neuroimage.usc.edu/brainstorm/Tutorials/AllIntroduction||rel=" noopener noreferrer" target="_blank"]] ===
36 36  
37 -**Level**: beginner(%%) **Type**: -
38 -
39 -=== **Intermediate** ===
40 -
41 -=== [[Reviewing – Event markers>>https://neuroimage.usc.edu/brainstorm/Tutorials/EventMarkers||rel=" noopener noreferrer" target="_blank"]] ===
42 -
43 -**Level**: intermediate(%%) **Type**: interactive tutorial
44 -
45 -=== [[Reviewing – Continuous recordings>>https://neuroimage.usc.edu/brainstorm/Tutorials/ReviewRaw||rel=" noopener noreferrer" target="_blank"]] ===
46 -
47 -**Level**: intermediate(%%) **Type**: interactive tutorial
48 -
49 -=== [[Reviewing – Multiple windows>>https://neuroimage.usc.edu/brainstorm/Tutorials/MultipleWindows||rel=" noopener noreferrer" target="_blank"]] ===
50 -
51 -**Level**: intermediate(%%) **Type**: interactive tutorial
52 -
53 -=== [[Reviewing – Channel file / MRI registration>>https://neuroimage.usc.edu/brainstorm/Tutorials/ChannelFile||rel=" noopener noreferrer" target="_blank"]] ===
54 -
55 -**Level**: intermediate(%%) **Type**: interactive tutorial
56 -
57 -=== **Advanced** ===
58 -
59 -=== [[Export surface source maps to SPM12>>https://neuroimage.usc.edu/brainstorm/ExportSpm12||rel=" noopener noreferrer" target="_blank"]] ===
60 -
61 -**Level**: advanced(%%) **Type**: -
62 -
63 -=== [[MEG current phantom (Elekta-Neuromag)>>https://neuroimage.usc.edu/brainstorm/Tutorials/PhantomElekta||rel=" noopener noreferrer" target="_blank"]] ===
64 -
65 -**Level**: advanced(%%) **Type**: -
66 -
67 -=== [[Plugins>>https://neuroimage.usc.edu/brainstorm/Tutorials/Plugins||rel=" noopener noreferrer" target="_blank"]] ===
68 -
69 -**Level**: advanced(%%) **Type**: -
70 -
71 -=== [[FEM mesh generation>>https://neuroimage.usc.edu/brainstorm/Tutorials/FemMesh||rel=" noopener noreferrer" target="_blank"]] ===
72 -
73 -**Level**: advanced(%%) **Type**: -
74 -
75 -=== [[Group analysis: Subject coregistration>>https://neuroimage.usc.edu/brainstorm/Tutorials/CoregisterSubjects||rel=" noopener noreferrer" target="_blank"]] ===
76 -
77 -**Level**: advanced(%%) **Type**: -
78 -
79 -=== [[FEM advanced tutorial with MEG/EEG Median nerve stimulation>>https://neuroimage.usc.edu/brainstorm/Tutorials/FemMedianNerve||rel=" noopener noreferrer" target="_blank"]] ===
80 -
81 -**Level**: advanced(%%) **Type**: -
82 -
83 -=== [[Connectivity>>https://neuroimage.usc.edu/brainstorm/Tutorials/Connectivity||rel=" noopener noreferrer" target="_blank"]] ===
84 -
85 -**Level**: advanced(%%) **Type**: -
86 -
87 -=== [[Corticomuscular coherence (CTF MEG)>>https://neuroimage.usc.edu/brainstorm/Tutorials/CorticomuscularCoherence||rel=" noopener noreferrer" target="_blank"]] ===
88 -
89 -**Level**: advanced(%%) **Type**: -
90 -
91 -=== [[Best: Brain Entropy in space and time>>https://neuroimage.usc.edu/brainstorm/Tutorials/TutBEst||rel=" noopener noreferrer" target="_blank"]] ===
92 -
93 -**Level**: advanced(%%) **Type**: -
94 -
95 -=== [[Epileptogenic Zone Fingerprint>>https://neuroimage.usc.edu/brainstorm/Tutorials/EZFingerprint||rel=" noopener noreferrer" target="_blank"]] ===
96 -
97 -**Level**: advanced(%%) **Type**: -
98 -
99 -=== [[SSP Cookbook>>https://neuroimage.usc.edu/brainstorm/Tutorials/SSPCookbook||rel=" noopener noreferrer" target="_blank"]] ===
100 -
101 -**Level**: advanced(%%) **Type**: -
102 -
103 -=== [[Elekta-Neuromag tutorial: Median nerve stimulation>>https://neuroimage.usc.edu/brainstorm/Tutorials/TutMindNeuromag||rel=" noopener noreferrer" target="_blank"]] ===
104 -
105 -**Level**: advanced(%%) **Type**: -
106 -
107 -=== [[Using BrainVISA>>https://neuroimage.usc.edu/brainstorm/Tutorials/SegBrainVisa||rel=" noopener noreferrer" target="_blank"]] ===
108 -
109 -**Level**: advanced(%%) **Type**: -
110 -
111 -=== [[MEG median nerve tutorial (CTF)>>https://neuroimage.usc.edu/brainstorm/Tutorials/MedianNerveCtf||rel=" noopener noreferrer" target="_blank"]] ===
112 -
113 -**Level**: advanced(%%) **Type**: -
114 -
115 -=== [[Spike Sorting in Brainstorm>>https://neuroimage.usc.edu/brainstorm/e-phys/SpikeSorting||rel=" noopener noreferrer" target="_blank"]] ===
116 -
117 -**Level**: advanced(%%) **Type**: -
118 -
119 -=== [[Coordinate systems>>https://neuroimage.usc.edu/brainstorm/CoordinateSystems||rel=" noopener noreferrer" target="_blank"]] ===
120 -
121 -**Level**: advanced(%%) **Type**: -
122 -
123 -=== [[Real-time head-tracking for adjusting head position>>https://neuroimage.usc.edu/brainstorm/Tutorials/TutRealtime||rel=" noopener noreferrer" target="_blank"]] ===
124 -
125 -**Level**: advanced(%%) **Type**: -
126 -
127 -=== [[Spectral Parameterization Resolved in Time (SPRiNT)>>https://neuroimage.usc.edu/brainstorm/Tutorials/SPRiNT||rel=" noopener noreferrer" target="_blank"]] ===
128 -
129 -**Level**: advanced(%%) **Type**: -
130 -
131 -=== [[Montage editor>>https://neuroimage.usc.edu/brainstorm/Tutorials/MontageEditor||rel=" noopener noreferrer" target="_blank"]] ===
132 -
133 -**Level**: advanced(%%) **Type**: -
134 -
135 -=== [[Tutorial - Head Motion>>https://neuroimage.usc.edu/brainstorm/Tutorials/HeadMotion||rel=" noopener noreferrer" target="_blank"]] ===
136 -
137 -**Level**: advanced(%%) **Type**: -
138 -
139 -=== [[Virtual Fiber Tracks for Connectivity Visualization>>https://neuroimage.usc.edu/brainstorm/Tutorials/FiberConnectivity||rel=" noopener noreferrer" target="_blank"]] ===
140 -
141 -**Level**: advanced(%%) **Type**: -
142 -
143 -=== [[MEG visual tutorial: Single subject (BIDS)>>https://neuroimage.usc.edu/brainstorm/Tutorials/VisualSingle||rel=" noopener noreferrer" target="_blank"]] ===
144 -
145 -**Level**: advanced(%%) **Type**: -
146 -
147 -=== [[Digitize EEG sensor locations and head shape>>https://neuroimage.usc.edu/brainstorm/Tutorials/TutDigitize||rel=" noopener noreferrer" target="_blank"]] ===
148 -
149 -**Level**: advanced(%%) **Type**: -
150 -
151 -=== [[MEG visual tutorial: Group analysis (BIDS)>>https://neuroimage.usc.edu/brainstorm/Tutorials/VisualGroup||rel=" noopener noreferrer" target="_blank"]] ===
152 -
153 -**Level**: advanced(%%) **Type**: -
154 -
155 -=== [[Converting to Brainstorm Events>>https://neuroimage.usc.edu/brainstorm/e-phys/ConvertToBrainstormEvents||rel=" noopener noreferrer" target="_blank"]] ===
156 -
157 -**Level**: advanced(%%) **Type**: -
158 -
159 -=== [[Synchronization with eye tracker (event transfer)>>https://neuroimage.usc.edu/brainstorm/Tutorials/EyetrackSynchro||rel=" noopener noreferrer" target="_blank"]] ===
160 -
161 -**Level**: advanced(%%) **Type**: -
162 -
163 -=== [[Using the anatomy templates>>https://neuroimage.usc.edu/brainstorm/Tutorials/DefaultAnatomy||rel=" noopener noreferrer" target="_blank"]] ===
164 -
165 -**Level**: advanced(%%) **Type**: -
166 -
167 -=== [[Fitting dipoles with FieldTrip>>https://neuroimage.usc.edu/brainstorm/Tutorials/DipoleFitting||rel=" noopener noreferrer" target="_blank"]] ===
168 -
169 -**Level**: advanced(%%) **Type**: -
170 -
171 -=== [[Deriving LFP signals from raw signals>>https://neuroimage.usc.edu/brainstorm/e-phys/RawToLFP||rel=" noopener noreferrer" target="_blank"]] ===
172 -
173 -**Level**: advanced(%%) **Type**: -
174 -
175 -=== [[MEG current phantom (CTF)>>https://neuroimage.usc.edu/brainstorm/Tutorials/PhantomCtf||rel=" noopener noreferrer" target="_blank"]] ===
176 -
177 -**Level**: advanced(%%) **Type**: -
178 -
179 -=== [[Resting state recordings from the OMEGA database>>https://neuroimage.usc.edu/brainstorm/Tutorials/RestingOmega||rel=" noopener noreferrer" target="_blank"]] ===
180 -
181 -**Level**: advanced(%%) **Type**: -
182 -
183 -=== [[Realistic head model: FEM with DUNEuro>>https://neuroimage.usc.edu/brainstorm/Tutorials/Duneuro||rel=" noopener noreferrer" target="_blank"]] ===
184 -
185 -**Level**: advanced(%%) **Type**: -
186 -
187 -=== [[Functions for Basic e-phys>>https://neuroimage.usc.edu/brainstorm/e-phys/functions||rel=" noopener noreferrer" target="_blank"]] ===
188 -
189 -**Level**: advanced(%%) **Type**: -
190 -
191 -=== [[MRI segmentation with FastSurfer>>https://neuroimage.usc.edu/brainstorm/Tutorials/SegFastSurfer||rel=" noopener noreferrer" target="_blank"]] ===
192 -
193 -**Level**: advanced(%%) **Type**: -
194 -
195 -=== [[ECoG/sEEG tutorial>>https://neuroimage.usc.edu/brainstorm/Tutorials/ECoG||rel=" noopener noreferrer" target="_blank"]] ===
196 -
197 -**Level**: advanced(%%) **Type**: -
198 -
199 -=== [[Using FreeSurfer>>https://neuroimage.usc.edu/brainstorm/Tutorials/LabelFreeSurfer||rel=" noopener noreferrer" target="_blank"]] ===
200 -
201 -**Level**: advanced(%%) **Type**: -
202 -
203 -=== [[Granger causality>>https://neuroimage.usc.edu/brainstorm/GrangerCausality||rel=" noopener noreferrer" target="_blank"]] ===
204 -
205 -**Level**: advanced(%%) **Type**: -
206 -
207 -=== [[EEG and epilepsy>>https://neuroimage.usc.edu/brainstorm/Tutorials/Epilepsy||rel=" noopener noreferrer" target="_blank"]] ===
208 -
209 -**Level**: advanced(%%) **Type**: -
210 -
211 -=== [[Yokogawa/KIT tutorial: Median nerve stimulation>>https://neuroimage.usc.edu/brainstorm/Tutorials/Yokogawa||rel=" noopener noreferrer" target="_blank"]] ===
212 -
213 -**Level**: advanced(%%) **Type**: -
214 -
215 -=== [[MRI segmentation with CIVET>>https://neuroimage.usc.edu/brainstorm/Tutorials/SegCIVET||rel=" noopener noreferrer" target="_blank"]] ===
216 -
217 -**Level**: advanced(%%) **Type**: -
218 -
219 -=== [[Fitting Oscillations and One-Over-F (FOOOF)>>https://neuroimage.usc.edu/brainstorm/Tutorials/Fooof||rel=" noopener noreferrer" target="_blank"]] ===
220 -
221 -**Level**: advanced(%%) **Type**: -
222 -
223 -=== [[Human Connectome Project: Resting-state MEG>>https://neuroimage.usc.edu/brainstorm/Tutorials/HCP-MEG||rel=" noopener noreferrer" target="_blank"]] ===
224 -
225 -**Level**: advanced(%%) **Type**: -
226 -
227 -=== [[T1-MRI Segmentation with BrainSuite>>https://neuroimage.usc.edu/brainstorm/Tutorials/SegBrainSuite||rel=" noopener noreferrer" target="_blank"]] ===
228 -
229 -**Level**: advanced(%%) **Type**: -
230 -
231 -=== [[Connectivity Graphs>>https://neuroimage.usc.edu/brainstorm/Tutorials/ConnectivityGraph||rel=" noopener noreferrer" target="_blank"]] ===
232 -
233 -**Level**: advanced(%%) **Type**: -
234 -
235 -=== [[Export raw files in BIDS format>>https://neuroimage.usc.edu/brainstorm/ExportBids||rel=" noopener noreferrer" target="_blank"]] ===
236 -
237 -**Level**: advanced(%%) **Type**: -
238 -
239 -=== [[How to write your own process>>https://neuroimage.usc.edu/brainstorm/Tutorials/TutUserProcess||rel=" noopener noreferrer" target="_blank"]] ===
240 -
241 -**Level**: advanced(%%) **Type**: -
242 -
243 -=== [[FEM tensors estimation with BrainSuite>>https://neuroimage.usc.edu/brainstorm/Tutorials/FemTensors||rel=" noopener noreferrer" target="_blank"]] ===
244 -
245 -**Level**: advanced(%%) **Type**: -
246 -
247 -=== [[MRI Segmentation with CAT12>>https://neuroimage.usc.edu/brainstorm/Tutorials/SegCAT12||rel=" noopener noreferrer" target="_blank"]] ===
248 -
249 -**Level**: advanced(%%) **Type**: -
250 -
251 -=== [[Export volume source maps to SPM8 / SPM12>>https://neuroimage.usc.edu/brainstorm/ExportSpm8||rel=" noopener noreferrer" target="_blank"]] ===
252 -
253 -**Level**: advanced(%%) **Type**: -
254 -
255 -