Wiki source code of Brainstorm
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3 | * ((( ==== **[[Beginner >>||anchor = "HBeginner-1"]]** ==== ))) | ||
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5 | * ((( ==== **[[Intermediate >>||anchor = "HIntermediate-1"]]** ==== ))) | ||
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7 | * ((( ==== **[[Advanced >>||anchor = "HAdvanced-1"]]** ==== ))) | ||
8 | |||
9 | === **Beginner** === | ||
10 | |||
11 | === [[Starting a new study – Explore the anatomy>>https://neuroimage.usc.edu/brainstorm/Tutorials/ExploreAnatomy||rel=" noopener noreferrer" target="_blank"]] === | ||
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13 | **Level**: beginner(%%) **Type**: interactive tutorial | ||
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15 | By attending this tutorial, learners will know to how to create a new subject, how to import the anatomy, how we can best use the MRI Viewer, what are fiducial points and how can we use them, how does the validation work and how to get MNI coordinates. | ||
16 | === [[Starting a new study – Create a new protocol>>https://neuroimage.usc.edu/brainstorm/Tutorials/CreateProtocol||rel=" noopener noreferrer" target="_blank"]] === | ||
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18 | **Level**: beginner(%%) **Type**: interactive tutorial | ||
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20 | If you are a complete beginner and new to Brainstorms start with this tutorial! | ||
21 | We will guide you through your first set up of the Brainstorm interface, the Database structure and files, how to create your first protocol and how to further explore your protocol and finally show you how you can set up a backup and how to change temporary folders. | ||
22 | === [[Brainstorm: Imaging neural activity at the speed of brain>>https://www.youtube.com/watch?v=30eFJUrRcN4||rel=" noopener noreferrer" target="_blank"]] === | ||
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24 | **Level**: beginner(%%) **Type**: video tutorial | ||
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26 | In this tutorial we will first give you a basic introduction into the objectives and basic principles of Brainstorms. In the following short demo you will get an insight into the database and processing, we will show you how to use notch filters and QC and how to import data into your project. You will further see how the source imaging works and how to use the time frequency decomposition. | ||
27 | {{html}} | ||
28 | <iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/30eFJUrRcN4" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> | ||
29 | {{/html}} | ||
30 | === [[Starting a new study – Import the subject anatomy>>https://neuroimage.usc.edu/brainstorm/Tutorials/ImportAnatomy||rel=" noopener noreferrer" target="_blank"]] === | ||
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32 | **Level**: beginner(%%) **Type**: interactive tutorial | ||
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34 | Picking up were we left off in the previous tutorial, we will now look into how to create a new subject, how to import the anatomy, how we can best use the MRI Viewer, what are fiducial points and how can we use them, how does the validation work and how to get MNI coordinates. | ||
35 | === [[Introduction tutorials>>https://neuroimage.usc.edu/brainstorm/Tutorials/AllIntroduction||rel=" noopener noreferrer" target="_blank"]] === | ||
36 | |||
37 | **Level**: beginner(%%) **Type**: - | ||
38 | |||
39 | === **Intermediate** === | ||
40 | |||
41 | === [[Reviewing – Event markers>>https://neuroimage.usc.edu/brainstorm/Tutorials/EventMarkers||rel=" noopener noreferrer" target="_blank"]] === | ||
42 | |||
43 | **Level**: intermediate(%%) **Type**: interactive tutorial | ||
44 | |||
45 | === [[Reviewing – Continuous recordings>>https://neuroimage.usc.edu/brainstorm/Tutorials/ReviewRaw||rel=" noopener noreferrer" target="_blank"]] === | ||
46 | |||
47 | **Level**: intermediate(%%) **Type**: interactive tutorial | ||
48 | |||
49 | === [[Reviewing – Multiple windows>>https://neuroimage.usc.edu/brainstorm/Tutorials/MultipleWindows||rel=" noopener noreferrer" target="_blank"]] === | ||
50 | |||
51 | **Level**: intermediate(%%) **Type**: interactive tutorial | ||
52 | |||
53 | === [[Reviewing – Channel file / MRI registration>>https://neuroimage.usc.edu/brainstorm/Tutorials/ChannelFile||rel=" noopener noreferrer" target="_blank"]] === | ||
54 | |||
55 | **Level**: intermediate(%%) **Type**: interactive tutorial | ||
56 | |||
57 | === **Advanced** === | ||
58 | |||
59 | === [[Export surface source maps to SPM12>>https://neuroimage.usc.edu/brainstorm/ExportSpm12||rel=" noopener noreferrer" target="_blank"]] === | ||
60 | |||
61 | **Level**: advanced(%%) **Type**: - | ||
62 | |||
63 | === [[MEG current phantom (Elekta-Neuromag)>>https://neuroimage.usc.edu/brainstorm/Tutorials/PhantomElekta||rel=" noopener noreferrer" target="_blank"]] === | ||
64 | |||
65 | **Level**: advanced(%%) **Type**: - | ||
66 | |||
67 | === [[Plugins>>https://neuroimage.usc.edu/brainstorm/Tutorials/Plugins||rel=" noopener noreferrer" target="_blank"]] === | ||
68 | |||
69 | **Level**: advanced(%%) **Type**: - | ||
70 | |||
71 | === [[FEM mesh generation>>https://neuroimage.usc.edu/brainstorm/Tutorials/FemMesh||rel=" noopener noreferrer" target="_blank"]] === | ||
72 | |||
73 | **Level**: advanced(%%) **Type**: - | ||
74 | |||
75 | === [[Group analysis: Subject coregistration>>https://neuroimage.usc.edu/brainstorm/Tutorials/CoregisterSubjects||rel=" noopener noreferrer" target="_blank"]] === | ||
76 | |||
77 | **Level**: advanced(%%) **Type**: - | ||
78 | |||
79 | === [[FEM advanced tutorial with MEG/EEG Median nerve stimulation>>https://neuroimage.usc.edu/brainstorm/Tutorials/FemMedianNerve||rel=" noopener noreferrer" target="_blank"]] === | ||
80 | |||
81 | **Level**: advanced(%%) **Type**: - | ||
82 | |||
83 | === [[Connectivity>>https://neuroimage.usc.edu/brainstorm/Tutorials/Connectivity||rel=" noopener noreferrer" target="_blank"]] === | ||
84 | |||
85 | **Level**: advanced(%%) **Type**: - | ||
86 | |||
87 | === [[Corticomuscular coherence (CTF MEG)>>https://neuroimage.usc.edu/brainstorm/Tutorials/CorticomuscularCoherence||rel=" noopener noreferrer" target="_blank"]] === | ||
88 | |||
89 | **Level**: advanced(%%) **Type**: - | ||
90 | |||
91 | === [[Best: Brain Entropy in space and time>>https://neuroimage.usc.edu/brainstorm/Tutorials/TutBEst||rel=" noopener noreferrer" target="_blank"]] === | ||
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93 | **Level**: advanced(%%) **Type**: - | ||
94 | |||
95 | === [[Epileptogenic Zone Fingerprint>>https://neuroimage.usc.edu/brainstorm/Tutorials/EZFingerprint||rel=" noopener noreferrer" target="_blank"]] === | ||
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97 | **Level**: advanced(%%) **Type**: - |