Changes for page Electrophysiology Analysis Toolkit
Last modified by abonard on 2025/04/10 15:14
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... ... @@ -1,26 +1,10 @@ 1 +Available tutorials: 1 1 3 +* [[Statistics of spike trains>>https://elephant.readthedocs.io/en/latest/tutorials/statistics.html||rel=" noopener noreferrer" target="_blank"]] (beginner) 4 +* [[ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains>>https://elephant.readthedocs.io/en/latest/tutorials/asset.html||rel=" noopener noreferrer" target="_blank"]] (advanced) 5 +* [[Gaussian Process Factor Analysis>>https://elephant.readthedocs.io/en/latest/tutorials/gpfa.html||rel=" noopener noreferrer" target="_blank"]] (advanced) 6 +* [[Parallel>>https://elephant.readthedocs.io/en/latest/tutorials/parallel.html||rel=" noopener noreferrer" target="_blank"]] (advanced) 7 +* [[Spike Pattern Detection and Evaluation (SPADE)>>https://elephant.readthedocs.io/en/latest/tutorials/spade.html||rel=" noopener noreferrer" target="_blank"]] (advanced) 8 +* [[The Unitary Events Analysis>>https://elephant.readthedocs.io/en/latest/tutorials/unitary_event_analysis.html||rel=" noopener noreferrer" target="_blank"]] (advanced) 9 +* [[Time-domain Granger Causality>>https://elephant.readthedocs.io/en/latest/tutorials/granger_causality.html||rel=" noopener noreferrer" target="_blank"]] (advanced) 2 2 3 -* ((( ==== **[[Beginner >>||anchor = "HBeginner-1"]]** ==== ))) 4 - 5 -* ((( ==== **[[Advanced >>||anchor = "HAdvanced-1"]]** ==== ))) 6 - 7 -=== **Beginner** === 8 - 9 -=== [[Statistics of spike trains>>https://elephant.readthedocs.io/en/latest/tutorials/statistics.html||rel=" noopener noreferrer" target="_blank"]] === 10 - 11 -**Level**: beginner(%%) **Type**: user documentation 12 - 13 -This notebook provides an overview of the functions provided by the elephant statistics module. 14 -=== **Advanced** === 15 - 16 -=== [[Spike Pattern Detection and Evaluation (SPADE)>>https://elephant.readthedocs.io/en/latest/tutorials/spade.html||rel=" noopener noreferrer" target="_blank"]] === 17 - 18 -**Level**: advanced(%%) **Type**: user documentation 19 - 20 -SPADE is a method to detect repeated spatio-temporal activity patterns in parallel spike train data that occur in excess to chance expectation. In this tutorial, we will use SPADE to detect the simplest type of such patterns, synchronous events that are found across a subset of the neurons considered. 21 -=== [[The Unitary Events Analysis>>https://elephant.readthedocs.io/en/latest/tutorials/unitary_event_analysis.html||rel=" noopener noreferrer" target="_blank"]] === 22 - 23 -**Level**: advanced(%%) **Type**: user documentation 24 - 25 -The Unitary Event analysis detects coordinated spiking activity that occurs significantly more often than predicted by the firing rates of neurons alone. It’s therefore superior to simple statistics. This tutorial will show you how to use this analysis in Elephant. 26 -