Attention: Due to an upgrade beginning on Friday, the 22nd August 2025, any new collabs, groups and any changes to teams will not be kept beyond the weekend. User creation will also be disabled during this time. The actual upgrade will take place on Wednesday, 27th August. On that day, any service requiring a Keycloak login will be unavailable for the duration of the upgrade. Thank you for your understanding as we complete this important work.


Changes for page Neuron

Last modified by abonard on 2025/06/13 16:11
From version 106.1
edited by abonard
on 2025/04/10 15:16
Change comment: There is no comment for this version
To version 226.1
edited by abonard
on 2025/06/03 11:05
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -197,23 +197,4 @@
197 197  **Level**: advanced(%%) **Type**: user documentation
198 198  
199 199  We will go over how to create an "unoptimized" model, set up a current clamp experiment on this model, configure a MultipleRunFitter to do a "run fitness" optimization, load the Experimental Data into the iclamp Run Fitness Generator, specify the parameters that will be adjusted and finally perform the optimization.
200 -=== [[Reaction-Diffusion – Hodgkin-Huxley using rxd>>https://neuron.yale.edu/neuron/docs/hodgkin-huxley-using-rxd||rel=" noopener noreferrer" target="_blank"]] ===
201 201  
202 -**Level**: advanced(%%) **Type**: interactive tutorial
203 -
204 -In this tutorial you will learn how to set the proper parameters for the Hodgkin–Huxley model in NEURON.
205 -=== [[Using the CellBuilder – Creating a stylised ("stick-figure") model cell>>https://neuron.yale.edu/neuron/static/docs/cbtut/stylized/outline.html||rel=" noopener noreferrer" target="_blank"]] ===
206 -
207 -**Level**: advanced(%%) **Type**: -
208 -
209 -Learn how to build an extremely simplified model of a pyramidal cell.
210 -=== [[Ball and Stick model part 2>>https://neuron.yale.edu/neuron/docs/ball-and-stick-model-part-2||rel=" noopener noreferrer" target="_blank"]] ===
211 -
212 -**Level**: advanced(%%) **Type**: user documentation
213 -
214 -=== [[Reaction-Diffusion Example – Circadian rhythm>>https://neuron.yale.edu/neuron/docs/example-circadian-rhythm||rel=" noopener noreferrer" target="_blank"]] ===
215 -
216 -**Level**: advanced(%%) **Type**: user documentation
217 -
218 -Here we develop a NEURON implementation of the Leloup-Goldbeter model for circadian rhythms in Drosophila. In this example NEURON's h library and its standard run system are being used as well as matplotlib to plot concentrations of circadian proteins over time.
219 -