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Changes for page Neuron

Last modified by abonard on 2025/04/10 15:17

From version 13.1
edited by abonard
on 2025/04/10 15:07
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To version 79.1
edited by abonard
on 2025/04/10 15:16
Change comment: There is no comment for this version

Summary

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64 64  **Level**: advanced(%%) **Type**: interactive tutorial
65 65  
66 66  The model presented in this tutorial generates Ca2+ waves and is a simplification of the model we used in Neymotin et al., 2015.
67 +=== [[Reaction-Diffusion – 3D/Hybrid Intracellular Tutorial>>https://neuron.yale.edu/neuron/docs/3dhybrid-intracellular-tutorial||rel=" noopener noreferrer" target="_blank"]] ===
67 67  
69 +**Level**: advanced(%%) **Type**: interactive tutorial
70 +
71 +This tutorial provides an overview of how to set up a simple travelling wave in both cases.
72 +=== [[Reaction-Diffusion – Initialization strategies>>https://neuron.yale.edu/neuron/docs/initialization-strategies||rel=" noopener noreferrer" target="_blank"]] ===
73 +
74 +**Level**: advanced(%%) **Type**: interactive tutorial
75 +
76 +In this tutorial you will learn how to implement cell signalling function in the reaction-diffusion system by characterising your problems by the answers to three questions: (1) Where do the dynamics occur, (2) Who are the actors, and (3) How do they interact?
77 +=== [[Ball and Stick model part 3>>https://neuron.yale.edu/neuron/docs/ball-and-stick-model-part-3||rel=" noopener noreferrer" target="_blank"]] ===
78 +
79 +**Level**: advanced(%%) **Type**: user documentation
80 +
81 +=== [[Using the CellBuilder – Introduction>>https://neuron.yale.edu/neuron/static/docs/cbtut/main.html||rel=" noopener noreferrer" target="_blank"]] ===
82 +
83 +**Level**: advanced(%%) **Type**: interactive tutorial
84 +
85 +The following tutorials show how to use the CellBuilder, a powerful and convenient tool for constructing and managing models of individual neurons. It breaks the job of model specification into a sequence of tasks:
86 +1. Setting up model topology (branching pattern).
87 +2. Grouping sections with shared properties into subsets.
88 +3. Assigning geometric properties (length, diameter) to subsets or individual sections, and specifying a discretization strategy (i.e. how to set nseg).
89 +4. Assigning biophysical properties (Ra, cm, ion channels, buffers, pumps, etc.) to subsets or individual sections.
90 +