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**Level**: advanced(%%) **Type**: interactive tutorial |
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The model presented in this tutorial generates Ca2+ waves and is a simplification of the model we used in Neymotin et al., 2015. |
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-=== [[Reaction-Diffusion – 3D/Hybrid Intracellular Tutorial>>https://neuron.yale.edu/neuron/docs/3dhybrid-intracellular-tutorial||rel=" noopener noreferrer" target="_blank"]] === |
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-**Level**: advanced(%%) **Type**: interactive tutorial |
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-This tutorial provides an overview of how to set up a simple travelling wave in both cases. |
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-=== [[Reaction-Diffusion – Initialization strategies>>https://neuron.yale.edu/neuron/docs/initialization-strategies||rel=" noopener noreferrer" target="_blank"]] === |
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-**Level**: advanced(%%) **Type**: interactive tutorial |
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-In this tutorial you will learn how to implement cell signalling function in the reaction-diffusion system by characterising your problems by the answers to three questions: (1) Where do the dynamics occur, (2) Who are the actors, and (3) How do they interact? |
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-=== [[Ball and Stick model part 3>>https://neuron.yale.edu/neuron/docs/ball-and-stick-model-part-3||rel=" noopener noreferrer" target="_blank"]] === |
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-**Level**: advanced(%%) **Type**: user documentation |
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-=== [[Using the CellBuilder – Introduction>>https://neuron.yale.edu/neuron/static/docs/cbtut/main.html||rel=" noopener noreferrer" target="_blank"]] === |
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-**Level**: advanced(%%) **Type**: interactive tutorial |
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-The following tutorials show how to use the CellBuilder, a powerful and convenient tool for constructing and managing models of individual neurons. It breaks the job of model specification into a sequence of tasks: |
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-1. Setting up model topology (branching pattern). |
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-2. Grouping sections with shared properties into subsets. |
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-3. Assigning geometric properties (length, diameter) to subsets or individual sections, and specifying a discretization strategy (i.e. how to set nseg). |
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-4. Assigning biophysical properties (Ra, cm, ion channels, buffers, pumps, etc.) to subsets or individual sections. |
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