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Changes for page Neuron

Last modified by abonard on 2025/06/13 16:11
From version 77.1
edited by abonard
on 2025/04/10 15:15
Change comment: There is no comment for this version
To version 259.1
edited by abonard
on 2025/06/13 16:09
Change comment: There is no comment for this version

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2 2  
3 3  * ((( ==== **[[Beginner >>||anchor = "HBeginner-1"]]** ==== )))
4 4  
5 -* ((( ==== **[[Advanced >>||anchor = "HAdvanced-1"]]** ==== )))
6 -
7 7  === **Beginner** ===
8 8  
9 9  === [[A NEURON Programming Tutorial - part C>>http://web.mit.edu/neuron_v7.4/nrntuthtml/tutorial/tutC.html||rel=" noopener noreferrer" target="_blank"]] ===
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52 52  **Level**: beginner(%%) **Type**: user documentation
53 53  
54 54  After this tutorial, students will be able to save data from the simulations and methods for increasing simulation speed.
55 -=== **Advanced** ===
56 56  
57 -=== [[Reaction-Diffusion – Radial Diffusion>>https://neuron.yale.edu/neuron/docs/radial-diffusion||rel=" noopener noreferrer" target="_blank"]] ===
58 -
59 -**Level**: advanced(%%) **Type**: -
60 -
61 -Using NEURON Radial diffusion can be implemented in rxd using multicompartment reactions. By creating a series of shells and borders with reactions between them dependent the diffusion coefficient.
62 -=== [[Reaction-Diffusion Example – Calcium Wave>>https://neuron.yale.edu/neuron/docs/reaction-diffusion-calcium-wave||rel=" noopener noreferrer" target="_blank"]] ===
63 -
64 -**Level**: advanced(%%) **Type**: interactive tutorial
65 -
66 -The model presented in this tutorial generates Ca2+ waves and is a simplification of the model we used in Neymotin et al., 2015.
67 -=== [[Reaction-Diffusion – 3D/Hybrid Intracellular Tutorial>>https://neuron.yale.edu/neuron/docs/3dhybrid-intracellular-tutorial||rel=" noopener noreferrer" target="_blank"]] ===
68 -
69 -**Level**: advanced(%%) **Type**: interactive tutorial
70 -
71 -This tutorial provides an overview of how to set up a simple travelling wave in both cases.
72 -=== [[Reaction-Diffusion – Initialization strategies>>https://neuron.yale.edu/neuron/docs/initialization-strategies||rel=" noopener noreferrer" target="_blank"]] ===
73 -
74 -**Level**: advanced(%%) **Type**: interactive tutorial
75 -
76 -In this tutorial you will learn how to implement cell signalling function in the reaction-diffusion system by characterising your problems by the answers to three questions: (1) Where do the dynamics occur, (2) Who are the actors, and (3) How do they interact?
77 -