Changes for page The Virtual Brain
Last modified by abonard on 2025/06/03 11:07
Summary
-
Page properties (1 modified, 0 added, 0 removed)
Details
- Page properties
-
- Content
-
... ... @@ -127,63 +127,4 @@ 127 127 {{html}} 128 128 <iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/gxhJku8KRYY" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> 129 129 {{/html}} 130 -=== [[Surface-based simulations and deep brain stimulations>>https://youtu.be/ZXLrvHc24xE||rel=" noopener noreferrer" target="_blank"]] === 131 131 132 -**Level**: advanced(%%) **Type**: video tutorial 133 - 134 -Jil Meier covers in this tutorial surface-based simulations as well as deep brain simulations answering what they are, when to use them and how? 135 -{{html}} 136 -<iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/ZXLrvHc24xE" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> 137 -{{/html}} 138 -=== [[Human Brain Project (HBP) TVB-NEST co-simulation>>https://youtu.be/dUuQe_SI5lE||rel=" noopener noreferrer" target="_blank"]] === 139 - 140 -**Level**: advanced(%%) **Type**: video tutorial 141 - 142 -Learn how to use the TVB-NEST toolbox co-simulation in the HBP collab. 143 -{{html}} 144 -<iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/dUuQe_SI5lE" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> 145 -{{/html}} 146 -=== [[Scripting tutorials – Surface simulation tutorial>>https://nbviewer.thevirtualbrain.org/url/docs.thevirtualbrain.org/tutorials/tutorial_s2_surface_simulation.ipynb||rel=" noopener noreferrer" target="_blank"]] === 147 - 148 -**Level**: advanced(%%) **Type**: interactive tutorial 149 - 150 -In addition to the components discussed for a region simulation here we introduce one new major component, that is: 151 - 152 -Cortex, the primary component of which is a mesh surface defining a 2d representation of the convoluted cortical surface embedded in 3d space. This object includes a range of ancillary information and methods required for using it in simulations. 153 - 154 -We will also introduce two new Monitors that make more sense in the context of surface simulations 155 -=== [[Scripting tutorials – Exploring a neural mass model>>https://nbviewer.thevirtualbrain.org/url/docs.thevirtualbrain.org/tutorials/tutorial_s3_exploring_a_model.ipynb||rel=" noopener noreferrer" target="_blank"]] === 156 - 157 -**Level**: advanced(%%) **Type**: interactive tutorial 158 - 159 -In this tutorial we will look into creating an interactive phase-plane, specifying stochastic integration and finally learn how to simulate and visualise these models. 160 -=== [[Scripting tutorials – Resting State Networks>>https://nbviewer.thevirtualbrain.org/url/docs.thevirtualbrain.org/tutorials/tutorial_s5_ModelingRestingStateNetworks.ipynb||rel=" noopener noreferrer" target="_blank"]] === 161 - 162 -**Level**: advanced(%%) **Type**: interactive tutorial 163 - 164 -We will demonstrate some starting points for modeling resting state networks in TVB, using the default data set. 165 -=== [[Brain stimulation in The Virtual Brain>>https://youtu.be/mskxBYKoeq0||rel=" noopener noreferrer" target="_blank"]] === 166 - 167 -**Level**: advanced(%%) **Type**: video tutorial 168 - 169 -Topics covered in this lesson by Andreas Spiegler: 170 -Introduction to stimulation paradigm and stimulation techniques 171 -How to model brain stimulation with TVB 172 -Region-based stimulus 173 -Surface-based stimulus 174 -Examples of stimulated network dynamics using 175 -Human brain model 176 -Mouse brain model 177 -Example of Transcranial Direct-Current Stimulation (tDCS) 178 -{{html}} 179 -<iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/mskxBYKoeq0" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> 180 -{{/html}} 181 -=== [[Modelling Epilepsy with The Virtual Brain>>https://youtu.be/YrSxnMo6Lr8||rel=" noopener noreferrer" target="_blank"]] === 182 - 183 -**Level**: advanced(%%) **Type**: video tutorial 184 - 185 -Julie Courtiol is covering in this tutorial the fundamentals of epilepsy and closes in on the question on how to build a virtual epileptic patient? The lessons is followed with a hands-on-guide through the iPython notebook and with creating your own epilepsy simulations with TVB. 186 -{{html}} 187 -<iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/YrSxnMo6Lr8" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe> 188 -{{/html}} 189 -