Changes for page The Virtual Brain

Last modified by abonard on 2025/06/03 11:07
From version 93.1
edited by abonard
on 2025/06/03 11:07
Change comment: There is no comment for this version
To version 98.1
edited by abonard
on 2025/06/03 11:07
Change comment: There is no comment for this version

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143 143  {{html}}
144 144  <iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/dUuQe_SI5lE" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
145 145  {{/html}}
146 +=== [[Scripting tutorials – Surface simulation tutorial>>https://nbviewer.thevirtualbrain.org/url/docs.thevirtualbrain.org/tutorials/tutorial_s2_surface_simulation.ipynb||rel=" noopener noreferrer" target="_blank"]] ===
146 146  
148 +**Level**: advanced(%%) **Type**: interactive tutorial
149 +
150 +In addition to the components discussed for a region simulation here we introduce one new major component, that is:
151 +
152 +Cortex, the primary component of which is a mesh surface defining a 2d representation of the convoluted cortical surface embedded in 3d space. This object includes a range of ancillary information and methods required for using it in simulations.
153 +
154 +We will also introduce two new Monitors that make more sense in the context of surface simulations
155 +=== [[Scripting tutorials – Exploring a neural mass model>>https://nbviewer.thevirtualbrain.org/url/docs.thevirtualbrain.org/tutorials/tutorial_s3_exploring_a_model.ipynb||rel=" noopener noreferrer" target="_blank"]] ===
156 +
157 +**Level**: advanced(%%) **Type**: interactive tutorial
158 +
159 +In this tutorial we will look into creating an interactive phase-plane, specifying stochastic integration and finally learn how to simulate and visualise these models.
160 +=== [[Scripting tutorials – Resting State Networks>>https://nbviewer.thevirtualbrain.org/url/docs.thevirtualbrain.org/tutorials/tutorial_s5_ModelingRestingStateNetworks.ipynb||rel=" noopener noreferrer" target="_blank"]] ===
161 +
162 +**Level**: advanced(%%) **Type**: interactive tutorial
163 +
164 +We will demonstrate some starting points for modeling resting state networks in TVB, using the default data set.
165 +=== [[Brain stimulation in The Virtual Brain>>https://youtu.be/mskxBYKoeq0||rel=" noopener noreferrer" target="_blank"]] ===
166 +
167 +**Level**: advanced(%%) **Type**: video tutorial
168 +
169 +Topics covered in this lesson by Andreas Spiegler:
170 +Introduction to stimulation paradigm and stimulation techniques
171 +How to model brain stimulation with TVB
172 +Region-based stimulus
173 +Surface-based stimulus
174 +Examples of stimulated network dynamics using
175 +Human brain model
176 +Mouse brain model
177 +Example of Transcranial Direct-Current Stimulation (tDCS)
178 +{{html}}
179 +<iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/mskxBYKoeq0" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
180 +{{/html}}
181 +=== [[Modelling Epilepsy with The Virtual Brain>>https://youtu.be/YrSxnMo6Lr8||rel=" noopener noreferrer" target="_blank"]] ===
182 +
183 +**Level**: advanced(%%) **Type**: video tutorial
184 +
185 +Julie Courtiol is covering in this tutorial the fundamentals of epilepsy and closes in on the question on how to build a virtual epileptic patient? The lessons is followed with a hands-on-guide through the iPython notebook and with creating your own epilepsy simulations with TVB.
186 +{{html}}
187 +<iframe width="560" height="315" src="https://www.youtube-nocookie.com/embed/YrSxnMo6Lr8" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share" allowfullscreen></iframe>
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189 +