Changes for page Elephant Tutorials

Last modified by denker on 2025/04/09 07:02
From version 39.2
edited by moritzkern
on 2022/09/12 20:44
Change comment: There is no comment for this version
To version 51.1
edited by moritzkern
on 2023/04/19 18:02
Change comment: There is no comment for this version

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7 7  (% style="color:#4e5f70" %)Interactive video tutorials on
8 8  neuronal data analysis using Elephant
9 9  
10 -(% style="color:#e74c3c" %)Upcoming Sessions:
11 -
12 -(% style="color:#e74c3c" %)13.09.22 EBRAINS Training on Brain Atlases and Simulation Services (Vienna)
13 -
14 -(% style="color:#e74c3c" %)07.11.22  Simulate with EBRAINS (Online)
10 +
15 15  )))
16 16  )))
17 17  
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19 19  (((
20 20  (% class="col-xs-12 col-sm-8" %)
21 21  (((
18 +== Upcoming training events ==
19 +
22 22  {{info}}
23 -== (% style="color:#000000" %)EBRAINS Training on Brain Atlases and Simulation Services (Vienna)(%%): ==
24 24  
25 -=== Information ===
22 +
26 26  
27 -Date: Tuesday, September 13, 2022
28 -
29 -Time: 15:30 - 17:30 CET (120 min)
30 -
31 -Registration & Agenda: [[https:~~/~~/flagship.kip.uni-heidelberg.de/jss/HBPm?m=showAgenda&meetingID=245>>https://flagship.kip.uni-heidelberg.de/jss/HBPm?m=showAgenda&meetingID=245]]
32 -
33 -=== Prerequisites ===
34 -
35 -There are no prerequisities for attending the session. But an EBRAINS account is required to get access to some of the tools and services that will be demonstrated. If you wish to utilize the 'practice' time to explore these tools by yourself, please create your account at [[https:~~/~~/ebrains.eu/register>>url:https://ebrains.eu/register]] (free of charge).
36 -
37 -=== Notebooks ===
38 -
39 -Elephant Tutorials/Events/ANA_2022/notebooks
40 -
41 41  
42 42  {{/info}}
43 43  
44 -{{info}}
45 -== Simulate with EBRAINS (Online) ==
46 -
47 -=== Information ===
48 -
49 -Date: Tuesday, November 07, 2022
50 -
51 -Time: 16:30‑18:30 CET (120 min)
52 -
53 -Registration & Agenda: [[https:~~/~~/flagship.kip.uni-heidelberg.de/jss/HBPm?m=showAgenda&meetingID=242>>https://flagship.kip.uni-heidelberg.de/jss/HBPm?m=showAgenda&meetingID=242]]
54 -
55 -=== Prerequisites ===
56 -
57 -There are no prerequisities for attending the session. But an EBRAINS account is required to get access to some of the tools and services that will be demonstrated. If you wish to utilize the 'practice' time to explore these tools by yourself, please create your account at [[https:~~/~~/ebrains.eu/register>>url:https://ebrains.eu/register]] (free of charge).
58 -{{/info}}
59 -
60 60  == A resource for kick-starting work with the Elephant library ==
61 61  
62 62  The Python library [[Electrophysiology Analysis Toolkit (Elephant)>>https://python-elephant.org||rel="noopener noreferrer" target="_blank"]] provides tools for the analysis of neuronal activity data, such as spike trains, local field potentials and intracellular data. In addition to providing a platform for sharing analysis codes from different laboratories, Elephant provides a consistent and homogeneous framework for data analysis, built on a modular foundation. The underlying data model is the Neo library, a framework which easily captures a wide range of neuronal data types and methods, including dozens of file formats and network simulation tools. A common data description, as provided by the Neo library, is essential for developing interoperable analysis workflows.
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99 99  Alessandra Stella|(% style="width:626px" %)Highlights two methods for detecting hidden spatio-temporal patterns in spike data.
100 100  |(% style="width:300px" %)GPFA|(% style="width:267px" %)Simon Essink|(% style="width:626px" %)Extract low-dimensional rate trajectories from the population spike activity.
101 101  |(% style="width:300px" %)Surrogate_techniques|(% style="width:267px" %)Peter Bouss|(% style="width:626px" %)Learn how to use different surrogate methods for spike trains to assist in formulating statistical null hypotheses in the presence of non-stationarity.
69 +|(% style="width:300px" %)NEST-Elephant|(% style="width:267px" %)(((
70 +Jessica Mitchell
102 102  
72 +Moritz Kern
73 +)))|(% style="width:626px" %)Learn how to simulate a neural network with NEST, analyse data with Elephant and visualize results with Viziphant.
74 +
75 +== List of past events ==
76 +
77 +
78 +April 5, 2023 **Data Analysis using Elephant (Hybrid), SMHB General Assembly**
79 +Location: Forschungszentrum Juelich, Germany
80 +
81 +
82 +(((
83 +November 10, 2022** Simulate with EBRAINS (Online)**
84 +Agenda: [[https:~~/~~/flagship.kip.uni-heidelberg.d/jss/HBPm?m=showAgenda&meetingID=242>>https://flagship.kip.uni-heidelberg.de/jss/HBPm?m=showAgenda&meetingID=242]]
85 +
86 +
87 +July 1, 2022 **Satellite tutorial at the annual CNS meeting (Online)**
88 +Program: [[https:~~/~~/ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-cns-2022.html>>https://ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-cns-2022.html]]
89 +
90 +
91 +June 13-15, 2022 **BASSES workshop (Rome, Italy)**
92 +Program: [[https:~~/~~/www.humanbrainproject.eu/en/education/ebrains- workshops/basses/>>https://www.humanbrainproject.eu/en/education/ebrains-workshops/basses/]]
93 +
94 +
103 103  
104 104  )))
97 +)))
105 105  
106 -
107 107  (% class="col-xs-12 col-sm-4" %)
108 108  (((
109 109  {{box title="**Contents**"}}