Changes for page Elephant Tutorials

Last modified by denker on 2026/01/22 10:27
From version 60.1
edited by denker
on 2026/01/22 10:23
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To version 31.2
edited by moritzkern
on 2022/06/29 13:48
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1 -XWiki.denker
1 +XWiki.moritzkern
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2 2  (((
3 3  (% class="container" %)
4 4  (((
5 -= (% style="color:#f39c12" %)Elephant Tutorial Space[[image:https://elephant.readthedocs.io/en/latest/_static/elephant_logo_sidebar.png||alt="Elephant logo" data-xwiki-image-style-alignment="end"]](%%) =
5 += (% style="color:#f39c12" %)Elephant Tutorial Space[[image:https://elephant.readthedocs.io/en/latest/_static/elephant_logo_sidebar.png||alt="Elephant logo" style="float:right"]](%%) =
6 6  
7 7  (% style="color:#4e5f70" %)Interactive video tutorials on
8 8  neuronal data analysis using Elephant
9 9  
10 -
10 +(% style="color:#e74c3c" %)**Upcoming: CNS 2022**
11 11  )))
12 12  )))
13 13  
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15 15  (((
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17 17  (((
18 -== Upcoming training events ==
18 +== CNS 2022 ==
19 19  
20 -{{info}}
21 -March 17, 2026: Elephant Training as part of the **[[//EduBrains Training Series//>>https://foldercase.com/proext.php?pid=466]]**
22 -\\June 15-July 31, 2026 **Advanced Neural Data Analysis and Neuroinformatics ANDA-NI (Jülich, Germany)**
23 -Website: [[https:~~/~~/andani.info>>https://andani.info]]
24 -{{/info}}
20 +(% class="wikigeneratedid" %)
21 +=== How to attend? ===
25 25  
23 +This session is being conducted as part of the [[online satellite tutorials of CNS*2022>>url:https://ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-cns-2022.html]].
24 +
25 +Date: Tuesday Juli 1, 2022
26 +
27 +Time: 9:00 to 12:00 CEST
28 +
29 +Location: Online (via zoom)
30 +
31 +Registration: **Free (but required)!** You can register [[here>>url:https://framaforms.org/incfocns-software-wg-cns2022-satellite-tutorials-registration-1654593600]]!
32 +
33 +Please note that to prevent spamming/zoom bombing during the session, __the link to the Zoom meeting will be sent out only to registrants.__
34 +
35 +=== Prerequisites ===
36 +
37 +There are no prerequisities for attending the session. But an EBRAINS account is required to get access to some of the tools and services that will be demonstrated. If you wish to utilize the 'practice' time to explore these tools by yourself, please create your account at [[https:~~/~~/ebrains.eu/register>>url:https://ebrains.eu/register]] (free of charge).
38 +
39 +
26 26  == A resource for kick-starting work with the Elephant library ==
27 27  
28 28  The Python library [[Electrophysiology Analysis Toolkit (Elephant)>>https://python-elephant.org||rel="noopener noreferrer" target="_blank"]] provides tools for the analysis of neuronal activity data, such as spike trains, local field potentials and intracellular data. In addition to providing a platform for sharing analysis codes from different laboratories, Elephant provides a consistent and homogeneous framework for data analysis, built on a modular foundation. The underlying data model is the Neo library, a framework which easily captures a wide range of neuronal data types and methods, including dozens of file formats and network simulation tools. A common data description, as provided by the Neo library, is essential for developing interoperable analysis workflows.
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65 65  Alessandra Stella|(% style="width:626px" %)Highlights two methods for detecting hidden spatio-temporal patterns in spike data.
66 66  |(% style="width:300px" %)GPFA|(% style="width:267px" %)Simon Essink|(% style="width:626px" %)Extract low-dimensional rate trajectories from the population spike activity.
67 67  |(% style="width:300px" %)Surrogate_techniques|(% style="width:267px" %)Peter Bouss|(% style="width:626px" %)Learn how to use different surrogate methods for spike trains to assist in formulating statistical null hypotheses in the presence of non-stationarity.
68 -|(% style="width:300px" %)NEST-Elephant|(% style="width:267px" %)(((
69 -Jessica Mitchell
70 70  
71 -Moritz Kern
72 -)))|(% style="width:626px" %)Learn how to simulate a neural network with NEST, analyse data with Elephant and visualize results with Viziphant.
73 -
74 -== List of past events ==
75 -
76 -
77 -
78 -August 25-26, 2025 **INCF-SeRC-EBRAINS-Sweden workshop on FAIR neuroscience 2025 on Managing and Analyzing electrophysiology data using Neo and Elephant (Stockholm, Sweden)**
79 -Program: [[https:~~/~~/www.ebrains.eu/news-and-events/tutorials-and-users-day-2025>>https://www.ebrains.eu/news-and-events/tutorials-and-users-day-2025]]
80 -
81 -
82 -March 12, 2025 **Accelerate Your Neuroscience Research with EBRAINS** **(Heidelberg, Germany)**
83 -Program: [[https:~~/~~/www.ebrains.eu/news-and-events/tutorials-and-users-day-2025>>https://www.ebrains.eu/news-and-events/tutorials-and-users-day-2025]]
84 -
85 -
86 -Sept. 24-Nov. 8, 2024 **Advanced Neural Data Analysis and Neuroinformatics ANDA-NI (Jülich, Germany)**
87 -Website: [[https:~~/~~/andani.info>>https://andani.info]]
88 -
89 -
90 -July 15, 2023 **CNS 2023, 32nd Annual Computational Neuroscience Meeting (Leipzig)**
91 -Program: [[https:~~/~~/www.cnsorg.org/cns-2023-meeting-program>>https://www.cnsorg.org/cns-2023-meeting-program]]
92 -
93 -
94 -April 5, 2023 **Data Analysis using Elephant (Hybrid), SMHB General Assembly (Jülich, Germany)**
95 -
96 -
97 -(((
98 -November 10, 2022** Simulate with EBRAINS (Online)**
99 -Agenda: [[https:~~/~~/flagship.kip.uni-heidelberg.d/jss/HBPm?m=showAgenda&meetingID=242>>https://flagship.kip.uni-heidelberg.de/jss/HBPm?m=showAgenda&meetingID=242]]
100 -
101 -
102 -July 1, 2022 **Satellite tutorial at the annual CNS meeting (Online)**
103 -Program: [[https:~~/~~/ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-cns-2022.html>>https://ocns.github.io/SoftwareWG/pages/software-wg-satellite-tutorials-at-cns-2022.html]]
104 -
105 -
106 -June 13-15, 2022 **BASSES workshop (Rome, Italy)**
107 -Program: [[https:~~/~~/www.humanbrainproject.eu/en/education/ebrains- workshops/basses/>>https://www.humanbrainproject.eu/en/education/ebrains-workshops/basses/]]
108 -
109 -
110 110  
111 111  )))
112 -)))
113 113  
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115 115  (((
116 116  {{box title="**Contents**"}}