Changes for page Elephant Tutorials

Last modified by denker on 2025/04/09 07:02

From version 7.1
edited by denker
on 2021/02/01 17:24
Change comment: There is no comment for this version
To version 5.4
edited by denker
on 2021/02/01 17:23
Change comment: There is no comment for this version

Summary

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18 18  
19 19  In this collaborative space, we provide hands on video tutorials based on Jupyter notebooks that showcase various types of data analysis, from simple to advanced. Most notebooks are based on a common dataset published at [[https:~~/~~/gin.g-node.org/INT/multielectrode_grasp>>https://gin.g-node.org/INT/multielectrode_grasp]] (for details cf. Brochier et al (2018) Scientific Data 5, 180055. [[https:~~/~~/doi.org/10.1038/sdata.2018.55>>url:https://doi.org/10.1038/sdata.2018.55]]). All video tutorials are approximately 30 minutes in length.
20 20  
21 -
22 22  == Access to the tutorials ==
23 23  
24 24  To access the tutorials, check out the drive space of this Collab. Video are available for download in the (% style="color:#f39c12" %)videos(%%) section, whereas the corresponding Jupyter notebooks are available in the (% style="color:#f39c12" %)notebooks(%%) folder. Notebooks can either be run directly on the EBRAINS Collaboratory (currently limited to HBP affiliated members), or downloaded and run locally. For local execution, please use the provided (% style="color:#f39c12" %)requirements.txt(%%) file to generate an appropriate Python environment.
25 25  
26 -=== Execution on the EBRAINS Collaboratory ===
25 +==== Execution on the EBRAINS Collaboratory ====
27 27  
28 28  * Open the EBRAINS lab by selecting the corresponding (% style="color:#f39c12" %)Lab(%%) menu entry on the left.
29 29  //Please note: Jupyterlab functionality is currently in beta and not yet available to non-HBP-affiliated Collaboratory users. Please check back in the near future.//
30 30  * In the lab, navigate to a particular notebook and open and execute it. To save changes you may want to make, please create a copy of the notebook in a Collab of your own (i.e., where you have write permissions).
31 31  
32 -=== Local execution ===
31 +==== Local execution ====
33 33  
34 34  * Open the EBRAINS drive by selecting the corresponding (% style="color:#f39c12" %)Drive(%%) menu entry on the left.
35 35  * Download a particular notebook and the (% style="color:#f39c12" %)requirements.txt(%%) to your computer.