Last modified by maaike on 2022/07/05 20:42
From version 13.1
edited by maaike
on 2022/06/23 10:48
Change comment: There is no comment for this version
To version 17.1
edited by maaike
on 2022/06/23 11:09
Change comment: There is no comment for this version

Summary

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24 24  * Learn how to build a simple query using the Knowledge Graph Query Builder
25 25  * Learn how to execute a query via python jupyter notebook
26 26  
27 -
28 28  === Knowledge Graph Search UI ===
29 29  
30 30  The Knowledge Graph search user inferface can be acces via: https:~/~/search.kg.ebrains.eu.
31 31  
32 -To find a dataset:
31 +To find a dataset you can use the search filters:
33 33  
34 -1) Select a category (i.e. Project, Dataset, Model, Software or Contributor
33 +1. Select a category (i.e. Project, Dataset, Model, Software or Contributor
34 +1. Select a modality/experimental approach (e.g. electrophysiology)
35 +1. Select a species (e.g. mus musculus (mouse))
35 35  
36 -2) Select a modality/experimental approach (e.g. electrophysiology)
37 +[[image:SearchStep1-3.png||alt="Steps 1-3: Refine search" height="398" width="700"]]
37 37  
38 -3) Select a species (e.g. mus musculus (mouse))
39 +You can refine you search even further by using the free text search. Based on your search criteria, you get a number of hits. When you select a dataset, you can read find a summary of the metadata on the dataset card (see example below).
39 39  
40 -[[image:SearchStep1-3.png||alt="Steps 1 to 3" height="341" width="600"]]
41 +[[image:SearchStep4.png||alt="Step 4: Dataset Card" height="500" width="700"]]
41 41  
43 +In the side panel, you can find an overview of the metadata that is available for this dataset. For example:
42 42  
43 -(% class="wikigeneratedid" %)
45 +1. The data descriptor is a pdf text file with detailed information about the dataset, including the methods, technical validation, usage notes and data organisation.
46 +1. Detailed subject metadata can be found in a separate tab (see below).
47 +
48 +[[image:SearchStep5.png||alt="Step 5: Subject metadata" height="400" width="700"]]
49 +
50 +In this dataset, a number of subjects were used with a C57BL/6J (wildtype) genotype. These were 4-9 months old (adult mice) with a weight between 38 - 47 gram. They were tested three times under aneasthesia, which is reflected by the "studied states" of the subject. Additional details regarding the tests is stored under additional remarks (currently not visible in the image).
51 +
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45 45  
46 -(% class="wikigeneratedid" %)
47 47  = =
48 48  
49 -(% class="wikigeneratedid" %)
50 50  = =
51 51  
52 -(% class="wikigeneratedid" %)
53 53  = =
54 54  
55 -(% class="wikigeneratedid" %)
56 56  = =
57 57  
58 -(% class="wikigeneratedid" %)
59 59  = =
60 60  
61 -(% class="wikigeneratedid" %)
62 62  = =
63 63  
64 -(% class="wikigeneratedid" %)
65 65  = =
66 66  
67 67  = Who has access? =
SearchStep4.png
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SearchStep5.png
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