Changes for page Practical Guide to Using the EBRAINS Knowledge Graph in (your) Research - User Examples
Last modified by maaike on 2022/07/05 20:42
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... ... @@ -40,7 +40,7 @@ 40 40 41 41 [[image:SearchStep1-3.png||alt="Steps 1-3: Refine search" height="398" width="700"]] 42 42 43 -You can refine you search even further by using the free text search. Based on your search criteria, you get a number of hits. 43 +You can refine you search even further by using the free text search. Based on your search criteria, you get a number of hits. ([[https:~~/~~/search.kg.ebrains.eu/?facet_type[0]=Dataset&facet_Dataset_modalityForFilter[0]=electrophysiology&facet_Dataset_speciesFilter[0]=Mus%20musculus>>https://search.kg.ebrains.eu/?facet_type[0]=Dataset&facet_Dataset_modalityForFilter[0]=electrophysiology&facet_Dataset_speciesFilter[0]=Mus%20musculus]]) 44 44 45 45 ==== Select a dataset ==== 46 46 ... ... @@ -50,7 +50,7 @@ 50 50 51 51 ==== Access detailed metadata ==== 52 52 53 -In the side panel, you can find an overview of the metadata that is available for this dataset. For example: 53 +In the side panel, you can find an overview of the metadata that is available for this dataset ([[https:~~/~~/search.kg.ebrains.eu/instances/7866daf2-7064-4fa0-b6a2-0b1c899ba35f>>https://search.kg.ebrains.eu/instances/7866daf2-7064-4fa0-b6a2-0b1c899ba35f]]). For example: 54 54 55 55 1. The data descriptor is a pdf text file with detailed information about the dataset, including the methods, technical validation, usage notes and data organisation. 56 56 1. Detailed subject metadata can be found in a separate tab (see below). ... ... @@ -76,6 +76,7 @@ 76 76 77 77 Go to the Query Builder: [[https:~~/~~/query.kg.ebrains.eu>>https://query.kg.ebrains.eu/#state=6a41dd5b-3cf9-4263-8a65-83d41f27677a&session_state=638c33f5-4551-4d70-8b1d-a5c900aa62d0&code=300f25d8-caac-4576-9a21-195ccc93fd31.638c33f5-4551-4d70-8b1d-a5c900aa62d0.4214dba9-b6d0-4331-9837-3e75a10cda14]] 78 78 79 + 79 79 ==== Select a category ==== 80 80 81 81 A query for the Knowledge Graph is always executed against a specific data structure (e.g. a "Dataset version"). First select the data structure for your query. ... ... @@ -83,7 +83,7 @@ 83 83 [[image:QB1.png||alt="Step 1: Select a category" height="520" width="700"]] 84 84 85 85 86 -==== Select a modality/experimental approach ====87 +==== Select an experimental approach ==== 87 87 88 88 Similar to the facetted filters in the Knowledge Graph Search UI, we can refine our query by defining the experimental approach of our interest, for example electrophysiology. 89 89 ... ... @@ -91,6 +91,13 @@ 91 91 92 92 [[image:QBstep2.png||alt="Step 2: Select modality" height="541" width="700"]] 93 93 95 + 96 +==== Select species ==== 97 + 98 +Similarly, we can refine our query for mice only. 99 + 100 +[[image:QBstep3.png||alt="Step 3: Select species" height="543" width="700"]] 101 + 94 94 = Who has access? = 95 95 96 96 Describe the audience of this collab.