Attention: The EBRAINS IDM/IAM will be down tomorrow, Wednesday 17nd December, from 17:00 CET for up to 30 minutes for maintenance. Please be aware that this will affect all services that require login or authentication.


Changes for page Atlas pipeline workflow

Last modified by drodarie on 2023/11/13 12:31
From version 17.2
edited by drodarie
on 2023/03/26 17:04
Change comment: There is no comment for this version
To version 17.3
edited by drodarie
on 2023/03/26 17:05
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -31,7 +31,7 @@
31 31  * (% style="color:#999999" %)How to estimate neuron sub-type densities based on literature findings (second introduction to (%%)[[atlas-densities>>https://github.com/BlueBrain/atlas-densities]](% style="color:#999999" %)).
32 32  * (% style="color:#999999" %)How to refine neuron densities based on linear densities.
33 33  * (% style="color:#999999" %)How to scale, rotate and bend neuron morphologies, based on the orientation and depth fields.
34 -* (% style="color:#999999" %)How to construct a circuit based on the resulting cell atlas model in BSB.
34 +* (% style="color:#999999" %)How to construct a circuit based on the resulting cell atlas model in [[BSB>>https://github.com/dbbs-lab/bsb]].
35 35  
36 36  Each item in the list correspond to a notebook in the lab. Items in grey are notebooks still in preparation and will be integrated in the HBP collab, as soon as possible.
37 37