Last modified by pierstanpaolucci on 2023/06/29 18:29
From version 18.1
edited by pierstanpaolucci
on 2021/09/22 10:49
Change comment: There is no comment for this version
To version 11.1
edited by pierstanpaolucci
on 2021/09/21 15:43
Change comment: There is no comment for this version

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2 2  (((
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5 -(% class="lead" id="HInteractiveExplorationofBrainStatesandSpatio-TemporalActivityPatternsinData-ConstrainedSimulations" %)
6 -Open the Lab link on the left to explore brain states and spatio-temporal cortical activity patterns on your own
5 += Interactive Exploration of Brain States and Spatio-Temporal Activity Patterns in Data-Constrained Simulations =
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7 += =
8 +
9 +Explore brain states and spatio-temporal cortical activity patterns on your own
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9 9  
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14 -**How the same network can generate different brain states with their specific propagation patterns and rhythms?**
17 += Open the Lab link on the left to launch the interactive simulation =
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19 +How the same network can generate different brain states with their specific propagation patterns and rhythms?
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16 16  In this Jupyter Lab the user can interactively change the neuromodulated fatigue parameters and observe in real-time the emergence of different categories of slow- wave wave-propagation patterns and the transition to an asynchronous regime on a columnar mean-field model equipped with lateral connections inferred from experimentally acquired cortical activity.
17 17  
18 18  The model displays the dorsal view of a mouse cortical hemisphere sampled by pixels of 100-micron size over a 25 mm2 field of view.
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21 21  
22 22  The experimental data set from which the model has been inferred has been provided by LENS and it is available in the EBRAINS KG (2)
23 23  
24 -The predecessor of this model can be found at (3)
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26 -The latest version of the code presented in the drive of this collab can be found at (4)
27 -
28 28  (1) Capone, C. et al. (2021) “Simulations Approaching Data: Cortical Slow Waves in Inferred Models of the Whole Hemisphere of Mouse” arXiv:2104.07445 [[https:~~/~~/arxiv.org/abs/2104.07445>>https://arxiv.org/abs/2104.07445]]
29 29  
30 30  (2) Resta, F., Allegra Mascaro, A. L., & Pavone, F. (2020). //Study of Slow Waves (SWs) propagation through wide-field calcium imaging of the right cortical hemisphere of GCaMP6f mice// [Data set]. EBRAINS. [[DOI: 10.25493/3E6Y-E8G>>url:https://doi.org/10.25493%2F3E6Y-E8G]]
31 31  
32 -(3) Mean Field Simulation of whole mouse hemisphere with parameters inferred from optical recordings [[https:~~/~~/search.kg.ebrains.eu/instances/e572362f-9461-4f9d-81e2-b69cd44185f4>>https://search.kg.ebrains.eu/instances/e572362f-9461-4f9d-81e2-b69cd44185f4]]
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34 -(% class="wikigeneratedid" id="H" %)
35 -(4) [[https:~~/~~/github.com/APE-group/InteractiveExplorationBrainStates>>https://github.com/APE-group/InteractiveExplorationBrainStates]]
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40 40  {{box title="**Contents**"}}