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Changes for page MLCE - PPIs prediction

Last modified by emacasali on 2023/01/11 16:04

From version 21.1
edited by emacasali
on 2023/01/11 15:53
Change comment: There is no comment for this version
To version 25.1
edited by emacasali
on 2023/01/11 16:00
Change comment: There is no comment for this version

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26 26  (% style="text-align:center" %)
27 27  [[image:image-20230111154917-1.png||height="47" width="225"]]
28 28  
29 +Finally, we can filter the approximated interaction matrix Mio for residues that are in geometric proximity in the structure (closer than 6Å):
29 29  
31 +(% style="text-align:center" %)
32 +[[image:image-20230111155023-1.png||height="48" width="253"]]
30 30  
34 +
31 31  = How to use the script =
32 32  
33 33  Please see the attached documentation files in Drive repository.
38 +
39 +
40 += References =
41 +
42 +~1. Scarbelli, G.; Morra, G.; Colombo, G., Predicting Interaction Sites from the Energetics of Isolated Proteins: A New Approach to Epitope Mapping, Biophys. J., 2010, 98, 1966, [[https:~~/~~/doi.org/10.1016%2Fj.bpj.2010.01.014>>https://doi.org/10.1016%2Fj.bpj.2010.01.014]]
43 +
44 +2. Genoni, A.; Morra, G.; Colombo, G., Identification of Domains in Protein Structures from the Analysis of Intramolecular Interactions, J. Phys. Chem. B, 2012, 116, 10, 3331–3343, [[https:~~/~~/doi.org/10.1021/jp210568a>>https://doi.org/10.1021/jp210568a]]
45 +
46 +
34 34  )))
35 35  
36 36  
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40 40  {{toc/}}
41 41  {{/box}}
42 42  
56 +
43 43  
44 44  )))
45 45  )))