Changes for page MLCE - PPIs prediction
Last modified by emacasali on 2023/01/11 16:04
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... ... @@ -26,13 +26,24 @@ 26 26 (% style="text-align:center" %) 27 27 [[image:image-20230111154917-1.png||height="47" width="225"]] 28 28 29 -Finally, we can filter the approximated interaction matrix for residues that are in geometric proximity in the structure (closer than 6) .29 +Finally, we can filter the approximated interaction matrix Mio for residues that are in geometric proximity in the structure (closer than 6Å): 30 30 31 +(% style="text-align:center" %) 32 +[[image:image-20230111155023-1.png||height="48" width="253"]] 31 31 32 32 33 33 = How to use the script = 34 34 35 35 Please see the attached documentation files in Drive repository. 38 + 39 + 40 += References = 41 + 42 +~1. Scarbelli, G.; Morra, G.; Colombo, G., Predicting Interaction Sites from the Energetics of Isolated Proteins: A New Approach to Epitope Mapping, Biophys. J., 2010, 98, 1966, [[https:~~/~~/doi.org/10.1016%2Fj.bpj.2010.01.014>>https://doi.org/10.1016%2Fj.bpj.2010.01.014]] 43 + 44 +2. Genoni, A.; Morra, G.; Colombo, G., Identification of Domains in Protein Structures from the Analysis of Intramolecular Interactions, J. Phys. Chem. B, 2012, 116, 10, 3331–3343, [[https:~~/~~/doi.org/10.1021/jp210568a>>https://doi.org/10.1021/jp210568a]] 45 + 46 + 36 36 ))) 37 37 38 38 ... ... @@ -42,6 +42,7 @@ 42 42 {{toc/}} 43 43 {{/box}} 44 44 56 + 45 45 46 46 ))) 47 47 )))