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Changes for page Morphology Alignment Tool

Last modified by rbakker on 2023/07/17 12:44
From version 11.1
edited by rbakker
on 2023/07/17 11:39
Change comment: There is no comment for this version
To version 14.1
edited by rbakker
on 2023/07/17 12:34
Change comment: Renamed back-links.

Summary

Details

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Content
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26 26  
27 27  The toolbox consists of
28 28  
29 -* [[Image preprocessing>>doc:.Image preprocessing.WebHome]] workflow.
29 +* [[Image preprocessing>>doc:Collabs.morphology-alignment-tool.Image preprocessing.WebHome]] workflow.
30 30  * Image and 'pieces of neurite' [[alignment tool>>doc:.Slice alignment tool.WebHome]].
31 31  * [[Neuron morphology viewer>>doc:.Neuron morphology viewer.WebHome]] that supports file format manipulations.
32 -* Registration pipeline for stitched neuron and associated stack of low-resolution section images.
32 +* [[Registration pipeline>>doc:.Registration pipeline.WebHome]] for stitched neuron and associated stack of low-resolution section images.
33 33  * Flatmap visualization tool in which the cortical distribution of the registered neuron can be shown in the Allen Mouse reference space CCF3.
34 34  * Database of long range projection neurons that have been registered to CCF3.
35 35