Changes for page openMINDS

Last modified by lzehl on 2022/09/08 11:24
From version 38.1
edited by lzehl
on 2021/03/21 10:54
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To version 46.3
edited by lzehl
on 2021/07/07 15:03
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Summary

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26 26  This collab appeals to members of the neuroscience community that are interested in:
27 -(**1**) describing their research products, conform with openMINDS
28 -(**2**) contributing to openMINDS
27 +(**1**) describing their research product in accordance with openMINDS
28 +(**2**) conceptually contributing to openMINDS
29 +(**3**) programmatically contributing to openMINDS
29 29  
30 30  = Who is openMINDS? =
31 31  
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33 -openMINDS is powered by **HBP** ([[**H**uman **B**rain **P**roject>>https://www.humanbrainproject.eu/en/||rel="noopener noreferrer" target="_blank"]]) and **EBRAINS** ([[**E**uropean **B**rain **R**ese**A**rch **IN**fra**S**tructure>>https://ebrains.eu/||rel="noopener noreferrer" target="_blank"]]), but looking for external contributions throughout the neuroscience community.
34 +openMINDS is powered by [[**HBP**>>https://www.humanbrainproject.eu/en/||rel="noopener noreferrer" target="_blank"]] (**H**uman **B**rain **P**roject) and [[**EBRAINS**>>https://ebrains.eu/||rel="noopener noreferrer" target="_blank"]], but looking for external contributions throughout the neuroscience community.
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36 -We, the openMINDS development team, currently unite knowledge from the EBRAINS curation, the EBRAINS Knowledge Graph, the EBRAINS Atlas, and the INCF Knowledge Space teams. If you want to get in touch with us, please contact us via our support email: [[openminds@ebrains.eu>>mailto:openminds@ebrains.eu]]
37 +We, the openMINDS development team, currently unite knowledge from the EBRAINS Curation Service, the EBRAINS Knowledge Graph, the EBRAINS Atlas Service, and the INCF Knowledge Space teams. If you want to get in touch with us, please contact us via our support email: [[openminds@ebrains.eu>>mailto:openminds@ebrains.eu]]
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39 39  Within EBRAINS, the openMINDS metadata models are adopted by the EBRAINS Knowledge Graph and Interactive Brain Atlas. In addition, openMINDS is currently in the process of being adopted by the [[Japan Brain/MINDS project>>https://brainminds.jp/en/||rel="noopener noreferrer" target="_blank"]].
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43 43  (((
44 44  {{box title="**Jump to...**"}}
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46 -» [[Documentation>>doc:.openMINDS core.WebHome]]
47 - » [[Metadata models & schemas>>doc:.openMINDS core.Metadata models & schemas.WebHome]]
48 - » [[Application details>>doc:.openMINDS core.Application details.WebHome]]
49 - » [[Technical details>>doc:.openMINDS core.Implementation details.WebHome]]
50 -» [[How to contribute>>doc:.openMINDS SANDS.WebHome]]
51 - » [[Code of conduct>>doc:.openMINDS SANDS.Code Of Conduct.WebHome]]
52 - » [[How to report & ask questions>>doc:.openMINDS SANDS.Report & ask questions.WebHome]]
47 +» [[Documentation>>doc:.Documentation.WebHome]]
48 + » [[Metadata models & schemas>>doc:.Documentation.Metadata models and schemas.WebHome]]
49 + » [[Application details>>doc:.Documentation.Application details.WebHome]]
50 + » [[Technical details>>doc:.Documentation.Implementation details.WebHome]]
51 +» [[How to contribute>>doc:.How to contribute.WebHome]]
52 + » [[Code of conduct>>doc:.How to contribute.Code Of Conduct.WebHome]]
53 + » [[Report & ask questions>>doc:.How to contribute.Report & ask questions.WebHome]]
54 + » [[Direct contributions>>doc:.How to contribute.Direct contributions.WebHome]]
53 53  » [[Tutorials>>doc:.Tutorials.WebHome]]
54 54   » Presentations
55 55   » Examples
56 56  » [[FAQs>>doc:.FAQs.WebHome]]
57 57  {{/box}}
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61 -(((
61 +{{box title="**Supported research products**"}}
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63 +[[Dataset>>||anchor="Dataset"]]
64 +[[MetaDataModel>>||anchor="MetaDataModel"]]
65 +[[Model>>||anchor="Model"]]
66 +[[Software>>||anchor="Software"]]
67 +{{/box}}
68 +
62 62  {{box title="**List of GitHub projects**"}}
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64 -[[openMINDS (main)>>https://github.com/HumanBrainProject/openMINDS]]
71 +[[openMINDS (central)>>https://github.com/HumanBrainProject/openMINDS]]
72 +[[openMINDS generator>>https://github.com/HumanBrainProject/openMINDS_generator]]
65 65  [[openMINDS core>>https://github.com/HumanBrainProject/openMINDS_core]]
66 66  [[openMINDS SANDS>>https://github.com/HumanBrainProject/openMINDS_SANDS]]
67 67  [[openMINDS controlledTerms>>https://github.com/HumanBrainProject/openMINDS_controlledTerms]]
68 -[[openMINDS instances>>https://github.com/HumanBrainProject/openMINDS_instances]]
69 -[[openMINDS generator>>https://github.com/HumanBrainProject/openMINDS_generator]]
76 +[[openMINDS computation>>https://github.com/HumanBrainProject/openMINDS_computation]]
77 +[[openMINDS ephys>>https://github.com/HumanBrainProject/openMINDS_ephys]]
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74 74  (((
75 -{{box title="**Supported research products**"}}
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77 -[[Dataset>>||anchor="Dataset"]]
78 -[[MetaDataModel>>||anchor="MetaDataModel"]]
79 -[[Model>>||anchor="Model"]]
80 -[[Software>>||anchor="Software"]]
84 +{{box title="**Acknowledgements**"}}
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86 +The metadata model specification and corresponding open source code was developed in part or in whole in the Human Brain Project, funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under Specific Grant Agreements No. 720270, No. 785907, and No. 945539 (Human Brain Project SGA1, SGA2, and SGA3).
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90 90  {{id name="Model"/}}**Model**: Within openMINDS a "Model" describes code and data defined around a computational model.
91 91  {{id name="Software"/}}**Software**: Within openMINDS a "Software" describes programs and other operating information used by a computer to handle data across different Datasets or Models.
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Collaboratory.Apps.Collab.Code.CollabClass[0]
Description
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1 +The open Metadata Initiative for Neuroscience Data Structures (openMINDS) is the umbrella project for community-driven, integrated metadata models for neuroscience graph databases. The openMINDS Collab provides a general overview of all openMINDS metadata models, their schemas and respective integration pipelines and APIs. It also provides documentation on how to contribute to and how to use openMINDS (including hands-on tutorials).
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openMINDS