Wiki source code of openMINDS

Version 35.1 by lzehl on 2021/03/21 10:00

Hide last authors
oschmid 14.2 1 (% class="jumbotron" style="background-color:white" %)
skoehnen 1.1 2 (((
oschmid 14.2 3 (% class="container" style="color:black;" %)
skoehnen 1.1 4 (((
lzehl 23.1 5 [[image:openMINDS_logo_github.png||alt="openMINDS logo" height="170px" style="margin-right:1em"]]
oschmid 15.1 6 The **o**pen **M**etadata **I**nitiative for **N**euroscience **D**ata **S**tructures:
7 Community-driven metadata models for neuroscience graph databases.
skoehnen 1.1 8 )))
9 )))
10
11 (% class="row" %)
12 (((
13 (% class="col-xs-12 col-sm-8" %)
14 (((
15 = What can I find here? =
16
lzehl 21.1 17 **+** general overview of openMINDS
18 **+** documentation for all openMINDS metadata models
19 **+** documentation for using openMINDS
20 **+** documentation for contributing to openMINDS
21 **+** tutorials
skoehnen 1.1 22
23 = Who has access? =
24
lzehl 11.1 25 (% style="text-align: justify;" %)
lzehl 20.1 26 This collab appeals to members of the neuroscience community that are interested in:
lzehl 21.1 27 (**1**) describing their research products, conform with openMINDS
lzehl 12.1 28 (**2**) contributing to openMINDS
29
lzehl 11.1 30 = Who is openMINDS? =
lzehl 7.1 31
lzehl 11.1 32 (% style="text-align: justify;" %)
lzehl 29.1 33 openMINDS is powered by **HBP** ([[**H**uman **B**rain **P**roject>>https://www.humanbrainproject.eu/en/||rel="noopener noreferrer" target="_blank"]]) and **EBRAINS** ([[**E**uropean **B**rain **R**ese**A**rch **IN**fra**S**tructure>>https://ebrains.eu/||rel="noopener noreferrer" target="_blank"]]), but looking for external contributions throughout the neuroscience community.
lzehl 11.1 34
35 (% style="text-align: justify;" %)
lzehl 27.1 36 We, the openMINDS development team, currently unite knowledge from the EBRAINS curation, the EBRAINS Knowledge Graph, the EBRAINS Atlas, and the INCF Knowledge Space teams. If you want to get in touch with us, please contact us via our support email: [[openminds@ebrains.eu>>mailto:openminds@ebrains.eu]]
lzehl 11.1 37
38 (% style="text-align: justify;" %)
lzehl 31.1 39 Within EBRAINS, the openMINDS metadata models are adopted by the EBRAINS Knowledge Graph and Interactive Brain Atlas. In addition, openMINDS is currently in the process of being adopted by the [[Japan Brain/MINDS project>>https://brainminds.jp/en/||rel="noopener noreferrer" target="_blank"]].
skoehnen 1.1 40 )))
41
lzehl 32.2 42 (% class="col-xs-12 col-sm-4" style="color:black;" %)
43 (((
44 {{box title="**Jump to...**"}}
45 (% class="small" style="margin-top: 0.6em;" %)
lzehl 34.2 46 » [[Documentation>>doc:.openMINDS core.WebHome]]
47 » [[openMINDS metadata models & schemas>>doc:.openMINDS core.Metadata models & schemas.WebHome]]
48 » [[openMINDS application details>>doc:.openMINDS core.Application details.WebHome]]
49 » [[openMINDS technical details>>doc:.openMINDS core.Implementation details.WebHome]]
50 » [[How to contribute>>doc:.openMINDS SANDS.WebHome]]
51 » [[Code of conduct>>doc:.openMINDS SANDS.Code Of Conduct.WebHome]]
52 » [[How to report and ask questions>>doc:.openMINDS SANDS.Report & ask questions.WebHome]]
53 » [[Tutorials>>doc:.Tutorials.WebHome]]
54 » Presentations
55 » Examples
56 » [[FAQs>>doc:.FAQs.WebHome]]
lzehl 32.2 57 {{/box}}
58 )))
skoehnen 1.1 59
lzehl 24.1 60 (% class="col-xs-12 col-sm-4" style="color:black;" %)
skoehnen 1.1 61 (((
lzehl 10.1 62 {{box title="**List of GitHub projects**"}}
oschmid 18.1 63 (% class="small" style="margin-top: 0.6em;" %)
lzehl 10.1 64 [[openMINDS (main)>>https://github.com/HumanBrainProject/openMINDS]]
65 [[openMINDS core>>https://github.com/HumanBrainProject/openMINDS_core]]
66 [[openMINDS SANDS>>https://github.com/HumanBrainProject/openMINDS_SANDS]]
67 [[openMINDS controlledTerms>>https://github.com/HumanBrainProject/openMINDS_controlledTerms]]
68 [[openMINDS instances>>https://github.com/HumanBrainProject/openMINDS_instances]]
69 [[openMINDS generator>>https://github.com/HumanBrainProject/openMINDS_generator]]
skoehnen 1.1 70 {{/box}}
lzehl 11.1 71 )))
skoehnen 1.1 72
lzehl 24.1 73 (% class="col-xs-12 col-sm-4" style="color:black;" %)
lzehl 11.1 74 (((
75 {{box title="**Supported research products**"}}
oschmid 17.1 76 (% class="small" style="margin-top: 0.6em;" %)
lzehl 32.1 77 Dataset{{footnote}}As **Dataset**, openMINDS considers all experimental data originating from human, animal or simulation studies.{{/footnote}}
78 MetaDataModel{{footnote}}As **MetaDataModel**, openMINDS considers all specifications for structuring metadata and/or file repositories.{{/footnote}}
79 Model{{footnote}}As **Model**, openMINDS considers all code and data defined around a computational model.{{/footnote}}
80 Software{{footnote}}As **Software**, openMINDS considers all programs and other operating information used by a computer to handle data across different Datasets or Models.{{/footnote}}
lzehl 11.1 81 {{/box}}
skoehnen 1.1 82 )))
83 )))
lzehl 32.2 84
85 {{putFootnotes/}}
Public

openMINDS