Wiki source code of openMINDS

Version 39.1 by lzehl on 2021/03/21 10:55
Show last authors
1 (% class="jumbotron" style="background-color:white" %)
2 (((
3 (% class="container" style="color:black;" %)
4 (((
5 [[image:openMINDS_logo_github.png||alt="openMINDS logo" height="170px" style="margin-right:1em"]]
6 The **o**pen **M**etadata **I**nitiative for **N**euroscience **D**ata **S**tructures:
7 Community-driven metadata models for neuroscience graph databases.
8 )))
9 )))
10
11 (% class="row" %)
12 (((
13 (% class="col-xs-12 col-sm-8" %)
14 (((
15 = What can I find here? =
16
17 **+** general overview of openMINDS
18 **+** documentation for all openMINDS metadata models
19 **+** documentation for using openMINDS
20 **+** documentation for contributing to openMINDS
21 **+** tutorials
22
23 = Who has access? =
24
25 (% style="text-align: justify;" %)
26 This collab appeals to members of the neuroscience community that are interested in:
27 (**1**) describing their research products, conform with openMINDS
28 (**2**) contributing to openMINDS
29
30 = Who is openMINDS? =
31
32 (% style="text-align: justify;" %)
33 openMINDS is powered by **HBP** ([[**H**uman **B**rain **P**roject>>https://www.humanbrainproject.eu/en/||rel="noopener noreferrer" target="_blank"]]) and **EBRAINS** ([[**E**uropean **B**rain **R**ese**A**rch **IN**fra**S**tructure>>https://ebrains.eu/||rel="noopener noreferrer" target="_blank"]]), but looking for external contributions throughout the neuroscience community.
34
35 (% style="text-align: justify;" %)
36 We, the openMINDS development team, currently unite knowledge from the EBRAINS curation, the EBRAINS Knowledge Graph, the EBRAINS Atlas, and the INCF Knowledge Space teams. If you want to get in touch with us, please contact us via our support email: [[openminds@ebrains.eu>>mailto:openminds@ebrains.eu]]
37
38 (% style="text-align: justify;" %)
39 Within EBRAINS, the openMINDS metadata models are adopted by the EBRAINS Knowledge Graph and Interactive Brain Atlas. In addition, openMINDS is currently in the process of being adopted by the [[Japan Brain/MINDS project>>https://brainminds.jp/en/||rel="noopener noreferrer" target="_blank"]].
40 )))
41
42 (% class="col-xs-12 col-sm-4" style="color:black;" %)
43 (((
44 {{box title="**Jump to...**"}}
45 (% class="small" style="margin-top: 0.6em;" %)
46 » [[Documentation>>doc:.openMINDS core.WebHome]]
47 » [[Metadata models & schemas>>doc:.openMINDS core.Metadata models & schemas.WebHome]]
48 » [[Application details>>doc:.openMINDS core.Application details.WebHome]]
49 » [[Technical details>>doc:.openMINDS core.Implementation details.WebHome]]
50 » [[How to contribute>>doc:.openMINDS SANDS.WebHome]]
51 » [[Code of conduct>>doc:.openMINDS SANDS.Code Of Conduct.WebHome]]
52 » [[How to report & ask questions>>doc:.openMINDS SANDS.Report & ask questions.WebHome]]
53 » [[Tutorials>>doc:.Tutorials.WebHome]]
54 » Presentations
55 » Examples
56 » [[FAQs>>doc:.FAQs.WebHome]]
57 {{/box}}
58 )))
59
60 (% class="col-xs-12 col-sm-4" style="color:black;" %)
61 (((
62 {{box title="**Supported research products**"}}
63 (% class="small" style="margin-top: 0.6em;" %)
64 [[Dataset>>||anchor="Dataset"]]
65 [[MetaDataModel>>||anchor="MetaDataModel"]]
66 [[Model>>||anchor="Model"]]
67 [[Software>>||anchor="Software"]]
68 {{/box}}
69 )))
70 )))
71
72 (% class="col-xs-12 col-sm-4" style="color:black;" %)
73 (((
74 {{box title="**List of GitHub projects**"}}
75 (% class="small" style="margin-top: 0.6em;" %)
76 [[openMINDS (main)>>https://github.com/HumanBrainProject/openMINDS]]
77 [[openMINDS core>>https://github.com/HumanBrainProject/openMINDS_core]]
78 [[openMINDS SANDS>>https://github.com/HumanBrainProject/openMINDS_SANDS]]
79 [[openMINDS controlledTerms>>https://github.com/HumanBrainProject/openMINDS_controlledTerms]]
80 [[openMINDS instances>>https://github.com/HumanBrainProject/openMINDS_instances]]
81 [[openMINDS generator>>https://github.com/HumanBrainProject/openMINDS_generator]]
82 {{/box}}
83 )))
84
85 (% class="col-xs-12 col-sm-12" style="color:grey;" %)
86 (((
87 (% style="margin-top: 0.6em;font-size: 14px" %)
88 {{id name="Dataset"/}}**Dataset**: Within openMINDS a "Dataset" describes experimental data originating from human, animal or simulation studies.
89 {{id name="MetaDataModel"/}}**MetaDataModel**: Within openMINDS a "MetaDataModel" describes specifications for structuring metadata and/or file repositories.
90 {{id name="Model"/}}**Model**: Within openMINDS a "Model" describes code and data defined around a computational model.
91 {{id name="Software"/}}**Software**: Within openMINDS a "Software" describes programs and other operating information used by a computer to handle data across different Datasets or Models.
92 )))
Public

openMINDS