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Last modified by lzehl on 2021/07/05 18:57
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... ... @@ -120,21 +120,29 @@ 120 120 Despite the simplification in comparison to JSON-Schema, the openMINDS schema templates are also, at the core, specially formatted JSON files using a particular syntax, meaning special key-value pairs that define the validation rules of a schema. Please find in the following a full documentation of the openMINDS schema template syntax and how it's key-value pairs need to be defined and interpreted. 121 121 122 122 (% style="text-align: justify;" %) 123 - For themore inexperienced programmers, let's start byexplainingfirstsomegeneraltermsthatwillbe laterusedin the openMINDS schema templatesyntax specification.More experienced programmersan of course skip these explanations and jumpdirectly further down.123 +Let's start by going through the syntax of a simple openMINDS schema, the contactInformation.schema.tpl.json: 124 124 125 -**What are strings, integers, floats or booleans?** Generally speaking strings, integers, floats or booleans are derived **data types**. A **string** is defined as a sequence of characters between quotes (e.g., ##"Is this a string? YES!"## or ##'thisIsAlsoAString'##). For a string, openMINDS accepts Unicode characters. An **integer** is a whole number, positive or negative, without decimals, of unlimited length (e.g., ##5##, ##-5## or ##1238921234##). A **float** represents a real number, written with a decimal point dividing the integer and fractional part, both of unlimited length (e.g., ##5.15##, ##-5.15## or ##1238921234.1345##). A **boolean** represents a logical proposition by means of the binary digits ##0## (##false##) and ##1## (##true##), especially in computing and electronics. How a boolean is written depends highly on the format or computational language. 125 +{{code language="json"}} 126 +{ 127 + "_type": "https://openminds.ebrains.eu/core/ContactInformation", 128 + "required": [ 129 + "email" 130 + ], 131 + "properties": { 132 + "email": { 133 + "type": "string", 134 + "_formats": [ 135 + "email" 136 + ], 137 + "_instruction": "Enter the email address of this person." 138 + } 139 + } 140 +} 141 +{{/code}} 126 126 127 -**What is a list or array?** A **list** is a data structure that is a mutable ordered sequence of values (also called items). The values of a list are typically defined between square brackets (e.g., ##[value1, value2, value3]##). Note that the values within a list do not have to have the same data type. In contrast, an **array** is a data structure that is a mutable unordered sequence of values of the same data type. What data types are accepted for values in a list or in an array is highly depending on the format or computational language. 143 +(% style="text-align: justify;" %) 144 +The **##"_type"##** identifies the schema type or namespace for the particular schema. In **##"required"##** all property names have to be listed {{footnote}}A list is a data structure that is an ordered sequence of elements. Each element inside of a list is typically called an item. Lists are defined by having values between square brackets **##[ ]##**.{{/footnote}} that must be provided and filled out in a valid instance of this schema type (here, only the property **##"email"##** is required). Under **##"properties"##**, information about the expected value for each property defining the particular schema is given in a nested dictionary {{footnote}}A dictionary is a data structure that consists of an unordered collection of key:value pairs. Dictionaries are defined by having these key:value pairs between curly brackets **##{...}##**.{{/footnote}} (here, the only property is **##"email"##**). In this nested dictionary, the **##"type"##** of the expected value should be specified (here, the value has to be of type **##"string"##** {{footnote}}Strings are defined as characters between quotes **##"..."##**.{{/footnote}}). For values of type **##"string"##** it is further possible to list the accepted formats of the **##"string"##** under **##"_formats"##** (here, the expected **##"string"##** value has to be formatted as **##"email"##** address {{footnote}}An email address, such as openminds@ebrains.eu, is made up from a local-part, the symbol **##@##**, and a domain, which may be a domain name or an IP address enclosed in brackets{{/footnote}}. 128 128 129 -**What is a key-value pair or an associative array?** A **key-value pair** (sometimes also called name-value pair, attribute-value pair, property-value pair, or field-value pair) is a basic data representation and standard language feature in computing languages, systems and applications. In most cases this concept is used to build an **associative array**, meaning an unordered list of unique keys with associated values typically defined within curly brackets (e.g., ##{key1: value1, key3: value3, key2:value2}##). What data types are accepted for keys and values highly depends on the format or computational language. Note that a value could also be a data structure, such as a list, an array or an associative array. 130 - 131 -**What is a dictionary and what is JSON?** 132 - 133 - 134 -==== Specification of the openMINDS schema template syntax ==== 135 - 136 -(coming soon) 137 - 138 138 === The openMINDS integration pipeline === 139 139 140 140 (//**coming soon**//) If you'd like to learn more about the openMINDS integration pipeline, especially if you'd like to contribute to it, please get in touch with us (the openMINDS development team) via the issues on the openMINDS or openMINDS_generator GitHub or the support email: openminds@ebrains.eu