Last modified by lzehl on 2021/07/02 17:06
From version 18.1
edited by lzehl
on 2021/02/22 16:50
Change comment: There is no comment for this version
To version 19.1
edited by lzehl
on 2021/02/22 17:58
Change comment: There is no comment for this version

Summary

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16 16  The openMINDS core metadata model contains schemas that can be used to describe the general origin, resource location, and content of research products in the field of neuroscience. Currently ( Feb 2021) this metadata model comprises 37 usable schemas, grouped into five classes:
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19 +(% class="small" style="color:#7f8c8d" %)Click on schema to discover the full HTML view of this schema.
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86 86  The openMINDS SANDS (**S**patial **A**nchoring for **N**euroscience **D**ata **S**tructures) metadata model contains schemas that can be used to capture the anatomical location of neuroscience data as well as to identify and highlight commonly used reference brain atlases and coordinate spaces. Currently (Feb 2021) this metadata model comprises 12 metadata schemas:
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92 +(% class="small" style="color:#7f8c8d" %)Click on schema to discover the full HTML view of this schema.
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88 88  {{container layoutStyle="columns"}}
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121 121  The openMINDS controlledTerms metadata model contains schemas that ensure consistent registration of well-defined terms, including linkages to existing ontological terms where applicable. Currently (Feb 2021) this metadata model comprises 38 nearly identical schemas:
122 122  
129 +(% style="text-align: right;" %)
130 +(% class="small" style="color:#7f8c8d" %)Click on schema to discover the full HTML view of this schema.
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123 123  {{container layoutStyle="columns"}}
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183 183  [[https:~~/~~/github.com/HumanBrainProject/openMINDS_controlledTerms>>https://github.com/HumanBrainProject/openMINDS_controlledTerms]]
184 184  
194 +=== openMINDS controlledTerms - terminologies ===
195 +
196 +The openMINDS instances repository holds a collection of metadata representations (instances) of selected schemas which content should be more controlled to ensure their consistent definition and usage for the entire EBRAINS Knowledge Graph. Currently the repository holds collections for the following schemas:
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198 +(% style="text-align: right;" %)
199 +(% class="small" style="color:#7f8c8d" %)Click on schema to discover the correspondingly, available instances (including their Knowledge Graph ID).
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201 +{{container layoutStyle="columns"}}
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203 +(% class="small" %)
204 +AgeCategory
205 +AnatomicalAxesOrientation
206 +BehavioralTask
207 +BiologicalSex
208 +CellType
209 +ContributionType
210 +CriteriaQualityType
211 +DatasetType
212 +Disease
213 +DiseaseModel
214 +EthicsAssessment
215 +FileBundleGrouping
216 +FileUsageRole
217 +)))
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219 +(% class="small" %)
220 +Genotype
221 +Language
222 +Laterality
223 +MetaDataModelType
224 +Modality
225 +ModelAbstractionLevel
226 +ModelScope
227 +OperatingDevice
228 +OperatingSystem
229 +Organ
230 +Phenotype
231 +PreparationType
232 +ProductAccessibility
233 +)))
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235 +(% class="small" %)
236 +ProgrammingLanguage
237 +QualitativeOverlap
238 +SoftwareApplicationCategory
239 +SoftwareFeature
240 +Species
241 +Strain
242 +Technique
243 +TermSuggestion*
244 +Terminology
245 +TissueSampleType
246 +TypeOfUncertainty
247 +UnitOfMeasurement
248 +)))
249 +{{/container}}
250 +
185 185  === openMINDS instances ===
186 186  
187 187  The openMINDS instances repository holds a collection of metadata representations (instances) of selected schemas which content should be more controlled to ensure their consistent definition and usage for the entire EBRAINS Knowledge Graph. Currently the repository holds collections for the following schemas:
188 188  
255 +(% style="text-align: right;" %)
256 +(% class="small" style="color:#7f8c8d" %)Click on schema to discover the correspondingly, available instances (including their Knowledge Graph ID).
257 +
189 189  {{container layoutStyle="columns"}}
190 190  (((
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Public

openMINDS