Last modified by lzehl on 2021/07/02 17:06

From version 6.1
edited by lzehl
on 2021/02/18 17:38
Change comment: There is no comment for this version
To version 12.1
edited by lzehl
on 2021/02/22 15:51
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -12,54 +12,149 @@
12 12  
13 13  === openMINDS core ===
14 14  
15 -The openMINDS core metadata model contains schemas that can be used to describe the general origin, resource location, and content of research products in the field of neuroscience. Currently this metadata model comprises 37 usable schemas:
15 +(% style="text-align: justify;" %)
16 +The openMINDS core metadata model contains schemas that can be used to describe the general origin, resource location, and content of research products in the field of neuroscience. Currently ( Feb 2021) this metadata model comprises 37 usable schemas, grouped into five classes:
16 16  
17 -* Affiliation
18 -* ContactInformation
19 -* Contribution
20 -* Organization
21 -* Person
22 -* ContentType
23 -* Copyright
24 -* FileBundle
25 -* FileInstance
26 -* FileRepository
27 -* Hash
28 -* License
29 -* DigitalIdentifier
30 -* DigitalIdentifierSchema
31 -* Funding
32 -* QuantitativeValue
33 -* QuantitativeValueRange
34 -* Dataset
35 -* DatasetVersion
36 -* MetaDataModel
37 -* MetaDataModelVersion
38 -* Model
39 -* ModelVersion
40 -* Project
41 -* Software
42 -* SoftwareVersion
43 -* ParameterSetting
44 -* Protocol
45 -* ProtocolExecution
46 -* Subject
47 -* SubjectGroup
48 -* SubjectGroupState
49 -* SubjectState
50 -* TissueSample
51 -* TissueSampleCollection
52 -* TissueSampleCollectionState
53 -* TissueSampleState
18 +{{container layoutStyle="columns"}}
19 +(((
20 +(% class="small" %)
21 +**ACTORS**
22 +Affiliation
23 +ContactInformation
24 +Contribution
25 +Organization
26 +Person
27 +(% class="small" %)
28 +**DATA**
29 +ContentType
30 +Copyright
31 +FileBundle
32 +FileInstance
33 +FileRepository
34 +Hash
35 +License
36 +)))
37 +(((
38 +(% class="small" %)
39 +**MISCELLANEOUS**
40 +DigitalIdentifier
41 +DigitalIdentifierSchema
42 +Funding
43 +QuantitativeValue
44 +QuantitativeValueRange
45 +(% class="small" %)
46 +**PRODUCTS**
47 +Dataset
48 +DatasetVersion
49 +MetaDataModel
50 +MetaDataModelVersion
51 +Model
52 +ModelVersion
53 +Project
54 +Software
55 +SoftwareVersion
56 +)))
57 +(((
58 +(% class="small" %)
59 +**RESEARCH**
60 +ParameterSetting
61 +Protocol
62 +ProtocolExecution
63 +Subject
64 +SubjectGroup
65 +SubjectGroupState
66 +SubjectState
67 +TissueSample
68 +TissueSampleCollection
69 +TissueSampleCollectionState
70 +TissueSampleState
71 +)))
72 +{{/container}}
54 54  
55 55  === openMINDS SANDS ===
56 56  
57 -xxx
76 +(% style="text-align: justify;" %)
77 +The openMINDS SANDS (**S**patial **A**nchoring for **N**euroscience **D**ata **S**tructures) metadata model contains schemas that can be used to capture the anatomical location of neuroscience data as well as to identify and highlight commonly used reference brain atlases and coordinate spaces. Currently (Feb 2021) this metadata model comprises 12 metadata schemas:
58 58  
59 -=== openMINDS controlledTerms ===
79 +{{container layoutStyle="columns"}}
80 +(((
81 +(% class="small" %)
82 +AnatomicalEntity
83 +AnatomicalEntityRelation
84 +Annotation
85 +AtlasTerminology
86 +)))
87 +(((
88 +(% class="small" %)
89 +BrainAtlas
90 +BrainAtlasVersion
91 +CoordinatePoint
92 +CoordinateSpace
93 +)))
94 +(((
95 +(% class="small" %)
96 +Electrode
97 +ElectrodeArray
98 +ElectrodeContact
99 +Image
100 +)))
101 +{{/container}}
60 60  
61 -xxx
103 +=== openMINDS controlledTerms - schemas ===
62 62  
105 +(% style="text-align: justify;" %)
106 +The openMINDS controlledTerms metadata model contains schemas that ensure consistent registration of well-defined terms, including linkages to existing ontological terms where applicable. Currently (Feb 2021) this metadata model comprises 38 schemas:
107 +
108 +{{container layoutStyle="columns"}}
109 +(((
110 +(% class="small" %)
111 +AgeCategory
112 +AnatomicalAxesOrientation
113 +BehavioralTask
114 +BiologicalSex
115 +CellType
116 +ContributionType
117 +CriteriaQualityType
118 +DatasetType
119 +Disease
120 +DiseaseModel
121 +EthicsAssessment
122 +FileBundleGrouping
123 +)))
124 +(((
125 +(% class="small" %)
126 +FileUsageRole
127 +Genotype
128 +Language
129 +Laterality
130 +MetaDataModelType
131 +Modality
132 +ModelAbstractionLevel
133 +ModelScope
134 +OperatingDevice
135 +OperatingSystem
136 +Organ
137 +Phenotype
138 +)))
139 +(((
140 +(% class="small" %)
141 +PreparationType
142 +ProductAccessibility
143 +ProgrammingLanguage
144 +QualitativeOverlap
145 +SoftwareApplicationCategory
146 +SoftwareFeature
147 +Species
148 +Strain
149 +Technique
150 +TermSuggestion\*
151 +Terminology
152 +TissueSampleType
153 +TypeOfUncertainty
154 +UnitOfMeasurement
155 +)))
156 +{{/container}}
157 +
63 63  === openMINDS instances ===
64 64  
65 65  xxx
Public

openMINDS